Microarray Probes on PGSC0003DMT400024045
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_24978_PI426222305 |
JHI_St_60k_v1 |
GCTGACATTTTGAGAACTGTATATTGACATACTTAAGTAGGTTAATGTCTCCTCTGTAAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400024045
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400024045 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G21295.1 |
+3 |
7e-10 |
61 |
67/274 (24%) |
Tudor/PWWP/MBT superfamily protein | chr3:7489635-7492296 FORWARD LENGTH=645 |
Transcript Sequence (1291 bp)
>PGSC0003DMT400024045 1291 pgsc_dm_v3.4
GTAAATTTTGTTTGTACATTACAGTATTTTTTTCTGGATTCAAAGAGGGTGAGACTCATG
GAGAAAGTAATCAAAGAGCAAAGAGAAGCAGACGTTTTTACTCCCCTATCGACTCGATAT
CTTTCTTGGAGAAATCAGTTCATTCTCAATCATCAAATATGGTTGCCACCTCTATTCATG
CTGCAGAAATTTCTTCTTCCAAGTCCATGAGTTCCTTGAAGAGTGAATCACAGAGCTCAC
ATAAAAAGAGAGAGACAACTGCAGGTAACAATGCATTGCGACCAACGAAGATGAACTTCA
AAGTCATCAGTCGTCCAGCAGTCAACAAATGGAAGCACAATGGGAAAGTGCATAATCAAC
ATTTTAAGAGCAGATCAGTTGTTTCAACTAATGAAAGAAGTACTGAATTTGGATCTAAGA
CTGAATCATTTGAAATCATGTCAAGGGATGTCAATCGGAAGTCTCAGCTTAGTCCAGGAA
ACAGTTTCACAGAGGACACCAGCATCCAAAGCCTTAGTTCAAAGTTCACCACGCGGAAGA
ATAGTACCAAGACATTAATAGATGTGCATATGACAGTTCAAAGCACTTATAGAGGAGAGC
ATACTCCCCTTGTTTCCTTAATGAGTAGATTAAATGGAAAGACAATCGTCGGGCACCCCA
TCAACATAGAAGTATTATATGATAGCTCAATGCTTCCTGTTGAAAAGGAGAGCTCTGATC
AACTGCAAAACAAAGGCAGAATGCCTCAACTTGTTTGGAGAACTTCAAAGAGAACTCCCG
TCTGTTACACAAGCTCTACCTCTTCTGCAACTAAGTATGAGAACCTTCAGCACAGCAGCA
ACAAACTTGGAGATTTAAGTTCCCAAGCTAGGAAAAATAGTCCATTTAATACTGAGTCTC
GTGGGAAGTTATCGAAGAAGCCAAACATGTCAAAGAATAAACCAAGATCACTCTACCTTG
CTGATTCCAGAATCAAGAATGCTGTAAAAGATACATGTGTCCCTGTGAAAGACATATTCA
TCAAGTTAATAGGGGCACTTGGAAATGTATGATCTTAAGCAAGAGGTGTTCATATATATG
GTGTATTTATTACCCTTTATGACTTTTTAAGTAGGAGAAGCTTTCTATAGATATTACAGT
TTGCTTAGTTTTTTCGTTCTAACTGCTGACATTTTGAGAACTGTATATTGACATACTTAA
GTAGGTTAATGTCTCCTCTGTAAGTATCCTTTTTAACTTACAAAAAATGAGCAAAATGAT
TGCTCAGTCTTATGTTCTTCTAATATGAAAT
