Microarray Probes on PGSC0003DMT400024042
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_24836_PI426222305 |
JHI_St_60k_v1 |
GCTGACATTTTGAGAACTGTATATTGACATACTTAAGTAGGTTAATGTCTCCTCTGTAAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400024042
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400024042 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G21295.1 |
+1 |
1e-31 |
129 |
63/106 (59%) |
Tudor/PWWP/MBT superfamily protein | chr3:7489635-7492296 FORWARD LENGTH=645 |
Transcript Sequence (1790 bp)
>PGSC0003DMT400024042 1790 pgsc_dm_v3.4
CTTGGCTCTGCAACTTTTCTTTTTGTTTTAGCGTGTGCTGGATGATGATAATGATGAAAG
TACTAAACTTTGCTAAAACCCCTTTTTAAATTTCTTCTCTAAGGAGCTGAATCTGAAGAT
TTTCTTTGTTTTCAGTAATAAAAAAAAATGGGAGGACCTGTTATAGAAAGAAGAGGAGGT
AGTGTAGTTTGGGTGCTGAGGCAAAATGGAACATGGTGGCCTGGGAGAATATTGTGTAGC
AATGAAATCCCAACTTCTGGGATTCTTTCTCGTACTGATTTCAGTTCAAGATTTCCAATT
AAGCTTCTTGGGAGAGATGATGCTTCTGTGTGTTGGTACAATTTGGAGAAGTCTAGCCGC
GTAAAGGCATTTCGATGTGGTGAGTTCGATGGTTGTATCAAAAAAGCTGAATCATCCAAG
AATTTTACCTATACTAAAAGCCTGAAATATGCACATAGAGAAGATGCAATTCTTCATGCT
CTTGAACTTGAGAAGCAAGACCAAGAGAAACTGGAAAGGCCAGTATTTTTTTCTGGATTC
AAAGAGGGTGAGACTCATGGAGAAAGTAATCAAAGAGCAAAGAGAAGCAGACGTTTTTAC
TCCCCTATCGACTCGATATCTTTCTTGGAGAAATCAGTTCATTCTCAATCATCAAATATG
GTTGCCACCTCTATTCATGCTGCAGAAATTTCTTCTTCCAAGTCCATGAGTTCCTTGAAG
AGTGAATCACAGAGCTCACATAAAAAGAGAGAGACAACTGCAGGTAACAATGCATTGCGA
CCAACGAAGATGAACTTCAAAGTCATCAGTCGTCCAGCAGTCAACAAATGGAAGCACAAT
GGGAAAGTGCATAATCAACATTTTAAGAGCAGATCAGTTGTTTCAACTAATGAAAGAAGT
ACTGAATTTGGATCTAAGACTGAATCATTTGAAATCATGTCAAGGGATGTCAATCGGAAG
TCTCAGCTTAGTCCAGGAAACAGTTTCACAGAGGACACCAGCATCCAAAGCCTTAGTTCA
AAGTTCACCACGCGGAAGAATAGTACCAAGACATTAATAGATGTGCATATGACAGTTCAA
AGCACTTATAGAGGAGAGCATACTCCCCTTGTTTCCTTAATGAGTAGATTAAATGGAAAG
ACAATCGTCGGGCACCCCATCAACATAGAAGTATTATATGATAGCTCAATGCTTCCTGTT
GAAAAGGAGAGCTCTGATCAACTGCAAAACAAAGGCAGAATGCCTCAACTTGTTTGGAGA
ACTTCAAAGAGAACTCCCGTCTGTTACACAAGCTCTACCTCTTCTGCAACTAAGTATGAG
AACCTTCAGCACAGCAGCAACAAACTTGGAGATTTAAGTTCCCAAGCTAGGAAAAATAGT
CCATTTAATACTGAGTCTCGTGGGAAGTTATCGAAGAAGCCAAACATGTCAAAGAATAAA
CCAAGATCACTCTACCTTGCTGATTCCAGAATCAAGAATGCTGTAAAAGATACATGTGTC
CCTGTGAAAGACATATTCATCAAGTTAATAGGGGCACTTGGAAATGTATGATCTTAAGCA
AGAGGTGTTCATATATATGGTGTATTTATTACCCTTTATGACTTTTTAAGTAGGAGAAGC
TTTCTATAGATATTACAGTTTGCTTAGTTTTTTCGTTCTAACTGCTGACATTTTGAGAAC
TGTATATTGACATACTTAAGTAGGTTAATGTCTCCTCTGTAAGTATCCTTTTTAACTTAC
AAAAAATGAGCAAAATGATTGCTCAGTCTTATGTTCTTCTAATATGAAAT
