Microarray Probes on PGSC0003DMT400023916
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_23512_PI426222305 |
JHI_St_60k_v1 |
TTGCTGTTCCTATTATAGCTGAAATTGATCTCTACAAGTATAATCCATGGGATCTACCTG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400023916
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400023916 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G01720.1 |
+3 |
1e-103 |
275 |
127/143 (89%) |
NAC (No Apical Meristem) domain transcriptional regulator superfamily protein | chr1:268471-269514 FORWARD LENGTH=289 |
Transcript Sequence (1350 bp)
>PGSC0003DMT400023916 1350 pgsc_dm_v3.4
TTTCAAAAGCACCTCTTTCTCTGTAACTACAAACATAAATCATATCATTTTTTGAAGAAA
AAGTAATGGTGGAATTGCAATTTCCTGCTGGATTTCGATTCCATCCAACTGATGAAGAGC
TTGTGATGCACTATTTATGTCGAAAATGCGCCTCACAGCCGATTGCTGTTCCTATTATAG
CTGAAATTGATCTCTACAAGTATAATCCATGGGATCTACCTGATTTGGCTTTGTATGGTG
AGAAAGAGTGGTATTTCTTTTCGCCGCGAGATCGGAAGTATCCGAACGGTTCACGGCCGA
ATCGAGCTGCGGGAAATGGATATTGGAAGGCGACGGGTGCGGATAAGCCGATTGGTCGTC
CAAAATCGATGGGAATTAAGAAAGCTTTGGTGTTTTACGCAGGCAAAGCTCCGAAGGGAG
AAAAAACAAATTGGATTATGCACGAATATCGACTTGCTCATGTTGATCGATCTGCTCGTA
ACAAGAACAACAGCTTAAGAGTGAGTAAAATGACCTGAATTCAGTGATTTGAGATTTGAT
CATTTTTGACTAATCGAATGTTTGCTTCTTTGTTTTTAGCTCGACGATTGGGTTTTATGT
CGAATCTACAATAAGAAGGGTACAACTGAGAAGAATCAACTGAATATTCGAAAAATGAAT
GTTGAAATGTCGCCGGCGGTGAGTGAAGGTGATGTAAAGCCGGAGATTATGCCGTATTCA
GTTTCAACAAAGCCGTCTTCGACGTCGTACCACGTTTACAATGACTTCACGTACTTTGAT
TCATCGGATTCTCTTCCAAAACTTCACACCGATTCCAGCTGCTCGGAGCACGTACCTTCG
CCGGAGTTCACATGCGAGAAGGAAGTTCAGAGCGAGCCGAAGGTGAAACTGAATGAGTGG
GAAAAAACTGCCCTTGATTTTCCATTTAATTACACAGATGCCACTACTTCTGAGTTGCAG
AGTTGTTATGAGATGTCACCGCTACAAGATATATTCATGTATCTGCAAAAGCCGTTTTAA
GTGGGGCCCGCCGATTTTCAATTTTTTCGATCGCACGTGCGAATGAGACTGAAGTCGATG
ACTTGGCACGTGCCGATGATTTGTAGGAATTGAAAAAAAGTAGCATCTTTGGGTTTTCCA
TTTGCTTTCACATTGGCTATTTTTTTTTGTTTTGGAGAAAAGAAAAAAACAAAACAAATT
GGTCGTATATAGTTTTTAGTAGAAGGAAGAAAAATTAGTAGAAAACTAAGTTGTGAAATG
ATATATTTATTGGATTTATTAGTATACTTGTGGAAGTATTTGATTGATACTCACAAATTA
TAAGGAATATTTAAACTCTGCGTATATGTA
