Microarray Probes on PGSC0003DMT400023038
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_5514_PI426222305 |
JHI_St_60k_v1 |
CGAGTTGTCAGGTAGCATATTTAACGTGTGTGTCTCCTTGTTTAATGTTATGATAGTTTA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400023038
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400023038 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G37580.1 |
+2 |
8e-18 |
80 |
43/106 (41%) |
RING/U-box superfamily protein | chr2:15764745-15765452 FORWARD LENGTH=235 |
Transcript Sequence (794 bp)
>PGSC0003DMT400023038 794 pgsc_dm_v3.4
CTTAATAATACATAATCAATTAATATCTTTGCCCAATTCCTCTACCACTAAAATTTCAAA
AACCTCTCCCCTTCACCGGCGCCGGCGTCTTCACCGGAGCTCCGACATGTCCCCTTTATT
TGCAATTGTCTCTCTGATCATACTTATAATCATACCGACTATTGTATACGCTTTCATCTA
CGCTATGAAACACCCGGATAACGTTTTCCGGCGAAGCTCCGGCGAAAGTTCCGGTGAGTC
GACCACCGGAATTATTACACATCATACGGATATGTTATCGACTGTAAAGTATGAAAAAAA
AACTTCGCCGGAGAAGGAGGAAGATTCCGGCAACGAGTGTCCGGTGTGTTTGACGGCGTT
TGTTGACGGAGAAGAAGTTAGACAATTGATGACGTGTAAACATATTTTTCATTTTTCTTG
TATTGATAAATGGCTTTGTTCTAAATCAAGTTGTCCTGTTTGCCGTGCTGCCGTTACCGT
TAAACGGCCTAAACGGCCGGCGGTTAACTTCGATGATGATTTCCGGCACGGTTTGCCGGA
TGCTGCTGCGTTAGTTTGATTGTTGTAATGCATTTTTACATTTTGTTCAACTGAATTTAT
TATTTTCGATTTCAATTTATGTATATATATATGTGAAGAATTAGATTATTTATATATTTA
TTTTGATTTAGTGTTATACGAGTTGTCAGGTAGCATATTTAACGTGTGTGTCTCCTTGTT
TAATGTTATGATAGTTTAAATATCTACTTGTACATGTGCATACCTAAATTGAAGGACATA
AATATCTGTTAACG
