Microarray Probes on PGSC0003DMT400022968
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_5749_PI426222305 |
JHI_St_60k_v1 |
GATACTGATAAGAGTTGGACAATAGGAAGCCACTAGCTTGTCAATTTGTCTATATAATGT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400022968
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400022968 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G55580.1 |
+3 |
1e-72 |
248 |
129/226 (57%) |
Regulator of chromosome condensation (RCC1) family protein | chr3:20612766-20615730 FORWARD LENGTH=488 |
Transcript Sequence (2448 bp)
>PGSC0003DMT400022968 2448 pgsc_dm_v3.4
CTTCTAGCTGCTTCTGAAACAAAAGTTCTGGAAACTTCTCTGTAGAAAATTTGTGAATTT
CGATTTTTTCTGAAGAAATGAGTGAAAATGGTGGAAGAGAAGAGGAAGAGGAGTTGAAAA
TGGAGGAACAGAAGAAGAAGTATGAGGTGTTAATGTGGGGATATCTTCCCGGAGTATTGT
CTCATAAGTCGCCGTTAACTTCTCCGGTGGAAGTTCAGTTGCCGGATAACGGAATCGATG
TTCAATCATGGAAGGATGTATGTGGAGGAGGTTGTGGTTTCGCTATGGCTATTTCAGGGT
CTGGAAAACTAATCACGTGGGGTTCTGCAGATGATCAAGGCCAAAGCTACTTGACTTCTG
GAAAACATGGGGAGACTCCAGAACCGTTTCCGCTTCCAACTGAAGATCCAATCGTGAAAG
CCGCAGCTGGTTGGGCACATTGTGTATCTGTTACTGAAAAGAATGATGTGTACACATGGG
GCTGGAAAGAATGTGTGCCTTCTTCCAAGGTTGTTGCAAATTTTGTTTCTGGAGGGAGTT
TTGAAGGGGATGCTATTCGGAAAGAATCAGTGCCAACTGACCAAGAAAGCCCTCAATCTC
AAGGCTCCAAGCCAATTGGTGGTTCAGTTGCTCACCAAGATAATAAAAAACCTGAAGAAA
CTGCAAAGAGGAGAAGAACAATGACGGCTAAACAAGAACTTGAAAGCCCACCCCTTGCTG
ACGAATCTCTTTCTGCACCAGCTTGTATTGTAGAACTGGATCCAGGGGTGAAGATAACCT
CCGTTGCTGCTGGAGGGCGCCACACTTTAGCATTGTCAGGTCATATGAAGTACGAAGATA
TGGAAGAACTATAATGTAAAGCAAGACACCTGATGCATCATATTTTTGCCGGATTTAGAT
GTGGGACAGGTATGGGGTTGGGGCTATGGAGGTGAAGGACAGCTTGGTTTAGGCTCCAGG
ATTAAAATTGTGGCTTCTCCTCATCTTATACCTTGTCTGGATGCTTCTTCACATGGACCT
GACCGGAGCCTTGGGAGTCCTCAAGGAAGCATTACCACTGGGAGTCAGAAACGTAAAGCC
TTGGGGAGCTACATAAAGAGTATTTCTTGTGGTGGTCGGCATAGTGCAGTAATCACAGAT
ACTGGGGTGCTGCTTACATTTGGCTGGGGATTGTATGGACAGTGTGGACTAGGTAATACA
AATGACGTGCTGAGGCCAACTTGTGTGTCTTCTCTATTGAACACTAGAATAGAAGCCGTG
GCAGGTGGACTGTGGCACTCTGTGTGCTTATGTGATCATGGGCGTGTGTATACTTTTGGG
GGAAATCAGTTTGGCCAATTGGGTCTAGGCACAGGCACCGACCACACAGAGACATCACCT
AGACTTGTGGATGCCCCAATACTGGAGAACAAGAATGCCAAGGTAGTGTCTTGTGGAGCT
CGCCATAGCGCAATAATGACAGGTAAGAGCCCAGACTCCAGACTGTCAAGAAGATGAAGT
GCATTTTCAGTCCTGATCAACTGGACAAACCGAGTTCTTTTTTTATTATTATTAATTGAA
GACAGCTAGGATTCACTTAGTTCAATCTTAGACATAATTATCTCATTTGTGGTGATCTGA
GATGGAGATGTTACATGCAATTGCTTATATAACTGTGACTAGTTAGTATTTGTAACTGAA
AATTCTTTGAAATTTTACGAGTAGTAAATATGCTTTCGACAACGAGTTTGAATATACTTG
TTTCCTACCCATGTGGGTACATCATATGGTCTGTTGTTCCACTATCAAATGTGTGTTAAA
TCAATCAGATACTGATAAGAGTTGGACAATAGGAAGCCACTAGCTTGTCAATTTGTCTAT
ATAATGTATATGTTAGTAATTTAAAGATATCTTTTGCTTTGACTTTAGATGACAGCAAAA
TTTATAGCTGGGGATGGAACAAGTATGGTCAGCTTGGCTTAGGTGATACAATTGACCGTA
ATGATCCTTGTGAAGTGCCCACCGACGATTGTATGCCGAAGAATGTAGCGTGTGGGTGGT
GGCACACACTATTACTTGCTGAAAGCCGTCCATGATCTCTCTCCGTTATTTGGAGAAAAG
CTAAGTAACCCACTGACAGCAACTCTCAGGTTTACTTTCAAGATTCTGGAGATGTTAGAG
CTGTAGTATTTGTTAAATCAATGTACAGCATGTTGATTGTAACATATTTTTAACTCACGT
ATTCTTCTCAAGTTTTATAGGCTTATTTGGTGTATGATAAGCTCTTTTTCCTCTTTAAGT
TTTACAAAATTCATCTTTTATGGACGATCTTGCTGGCATGTTAAAGAAAAATGTGGCAAG
CTGAGAAATACCATGTAAAGCTTCAGCTTGGCCACTGCAGATGGCGAAGGCTGGGTCAAA
GAGAAACATTTCTTTTAGAGCTGCCGCATGTTTTATTACTAAAGAAAG
