Microarray Probes on PGSC0003DMT400022952
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_5728_PI426222305 |
JHI_St_60k_v1 |
TTGGCAATTGAACATGTTTCTCATACTACTTGAATCAAGCGCACGCATGACATGAAACTA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400022952
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400022952 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G37790.1 |
+1 |
7e-167 |
478 |
227/314 (72%) |
NAD(P)-linked oxidoreductase superfamily protein | chr2:15838838-15840752 FORWARD LENGTH=314 |
Transcript Sequence (1471 bp)
>PGSC0003DMT400022952 1471 pgsc_dm_v3.4
TACTCATCAATAACTTTTTCTCTCTTTGGCAGTATACGGTTCACTATCTTTTTTTTCAAT
TTCCCTCCTCTTTTTGTATCAATGGCGGAGGCGACGGAGATGCCGTACTTTAAGTTGAAT
ACCGGTTTCAGCATTCCGGCGGTCGGTTTGGGAACATGGCAGTCCGATCCCGGTGTCGTC
GGCAAAGCTGTGGAGACTGCTATCAAGATGGGTTACCGGCATATTGATTGTGCTCAAATT
TATAAAAATGAGAAGGAGATTGGTGAAGTTTTGAGCAGGCTGTTTAAAGATGGTGTTGTC
AAGAGGCAAGATCTATTCATTACATCCAAACTCTGGAACACTAATCATGCACCTGAAGAT
GTACCAGTCACACTAGACAAAACTCTTAAAGACTTGCAGCTGGAATACGTTGACCTGTAC
CTCATCCATTGGCCTGTCAGTATGAAGCCTGGATCAGTTGACTTTAAACCTGAAAATCTT
ATGCCAACCAACATACCCAGCATATGGGAAGCAATGGAAAAAGTTTATGATTCCGGGAAG
GCTAGAGTTATTGGTGTTAGCAATTTCTCTACTAAGAAACTGGGAGATCTTTTACAAGTA
GCACGTATTCGTCCTGCTGTCAACCAGGTGGAGTGCCATCCTTCGTGGCAACAAACCAAA
TTGCGGGAGTTCTGTGAATCCAATGAAGTGCACCTCTCTGCATATTCGCCGCTTGGGTCT
CCAGGTACAACATGGCTTAAAAGTGATGTGCTAAAGCAGCCAGCTGTAATCTCAGTTGCT
GAGAAATTGGGCAAGACTCCTGCACAGGTTTGTCTTCGTTGGGGCATTCAGATGGGTCAG
AGTGTACTTCCTAAGAGCACACATGAAGCACGGATTAAAGAGAATCTTGATGTACTGAAC
TGGTCTATACCTGATGACTTACTTGCCAAGTTCTCTGAAATTCCACAGGCAAGGCTGCTG
AGAGGCACTTCATTTGCTAATGAGACGCATGGGCAGTACAGAACACTTGAAGAGCTGTGG
GATGATGAGATCTAAGGTCACAGTATGAATTAACTGTTGAAGATAGGCAAATATTAATCC
ATTTGTCTCAGAGATTTAAGCTTCTTGTGCACTTCCTTTTCCTTAGAACTTTTGGAGATA
GGTGAATTGTCAACCATTAGATGTAGGTTTCCTTGCACCCCTTGTCCCTCTATTGACTCT
ATACTGGAAAACCATTCAAGAATCTTGCAGATTCTATGAGACGGTATTCAAACATTTGAT
TTGCTGGGATAATACTATGCTCCTGGTGAGACTATATCCCCTTCCTTTCGTTTGGTGGAT
GACTTAAGTACTTAGTTTTGTCTATCAGACGGGGGAAGGAAAAAAAAGAAAAACAGAGTA
GTGTTGAGGTTTTAAACATCAATGTTAATACTTGGCAATTGAACATGTTTCTCATACTAC
TTGAATCAAGCGCACGCATGACATGAAACTA
