Microarray Probes on PGSC0003DMT400022546
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_24331_PI426222305 |
JHI_St_60k_v1 |
GATGGCACATGCCAAAGTCATGATTGAAATTGTCGCTTGTTTGAAATGTTTTGTTATGAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400022546
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400022546 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G21690.1 |
+3 |
9e-91 |
285 |
134/199 (67%) |
MATE efflux family protein | chr3:7638750-7641861 FORWARD LENGTH=506 |
Transcript Sequence (1097 bp)
>PGSC0003DMT400022546 1097 pgsc_dm_v3.4
CATTTTGCCTTTCCTTGTGTTTGGTGGTGAATAACTCAAGCATGTCAATTTCTGGTTGGG
TCTTCATGATATCAGTTGGATTCAATGCAGCAGCAAGTGTGAGAGTGAGCAATGAACTAG
GAGCAAGGCATCCCAAATCAGCAGCTTTTTCTGTTGTCGTGGTTACATCGTGGTCTTTCA
TTCTCTCAATGATTGCTGCAGTCATCGTTCTTGCATTGCGTAATCTCATCAGTTATGCCT
TCACTGAAGGTGAAGTCGTGGCTGAAGCTGTCTCGGATCTTTGTCCATTGCTTGCGCTTT
CCCTCATCCTCAACGGAATTCAGCCCGTCTTGTCAGGTGTGGCCGTTGGCTGTGGATGGC
AAGCCTTCGTGGCCTATGTCAATATAGGCTGCTATTACATTGTCGGAGTTCCATTGGGTG
TTCTTCTCGGCTTTTACTTCAAACTTGGCGCTAAGGGAATATGGTCAGGAATGCTGGGAG
GTACAGTGATGCAAACAATCATTTTAATATGGATCACCGCTCGAACTGATTGGAATAAAG
AGGTGGAATCAGCTCAGAGTAGGTTGAAAATGTGGGATGACAAGAAAGAATCAATTCTAG
AGGAATAGATGAATTTAGGATGGACAAAAAGGAGGTTCATGCTAAGGGATTTTCCCATGT
TTTCTCTAACAAATGGGGTTTCCACAAAGCTAATAATGCAGTAATAATACCAATTTTTGA
ATGAAGATGATCAAGAATCAAGATTAATTATGAAGTTGATATAGAAATTGTAGTCAAGGT
CCAAAAAATATTTCCCACCCAATGCACCCATTTAAGATGTAACTTGCCACTGATTTTTTG
TTGTAATGATGGCTTCTTTGGACATAGGGAGATATGAGTATATGTATGTTAATTATCTAT
ACAAGTGGATGAACTAGTGAGGGAGTTTGAAGCTCAATTTCATTATTGGGTAACTATAGT
AAATTCCTGTAATGAGCCAAGGATGGCACATGCCAAAGTCATGATTGAAATTGTCGCTTG
TTTGAAATGTTTTGTTATGAAATAAAATTGTATCGTTGCTATTAGTTAAATATATAATTT
TTGACATGATGGTATCA
