Microarray Probes on PGSC0003DMT400022545
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_24410_PI426222305 |
JHI_St_60k_v1 |
GATGGCACATGCCAAAGTCATGATTGAAATTGTCGCTTGTTTGAAATGTTTTGTTATGAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400022545
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400022545 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G21690.1 |
+1 |
0.0 |
699 |
370/511 (72%) |
MATE efflux family protein | chr3:7638750-7641861 FORWARD LENGTH=506 |
Transcript Sequence (2073 bp)
>PGSC0003DMT400022545 2073 pgsc_dm_v3.4
GTTTTTTTCCCCAACTTTATCCTCTTTCCTCAGTCACCGGAATTCATGGCTTCGCCGGAA
AACGACATTTACCGGCCATTTCTACAAAACAATGTAACATCATTATCACCACAATTATCC
GAAACTCACAATTTCGAATCAAGCAACGAGCTCGAAACTGTGCTATTGGACACTGAAATA
CCTCTCTGGAGTAAACTCCGATTAGCGACATGGATCGAAATGAAGTTCCTCTTCTTCCTT
GCTGCTCCAGCGGTTATGGTTTACATGATTAATTACATCATGTCTATGTCTACTCAGATA
TTCTCCGGTCACTTGGGTAATCTTGAGCTTGCTGCTGCTTCACTTGGAAATACTGGGATT
CAAGTCTTTGCTTATGGTCTTATGTTGGGCATGGGAAGTGCAGTGGAAACACTATGTGGT
CAAGCATTTGGGGCAAAGAAATACGATATGCTTGGAGTTTATCTTCAAAGATCGACAGTT
CTGTTAACTCTAACAGGAATTTTACTCACCATAATGTACATTTTCTGCAAGCCGATTCTA
ATATTTCTAGGCCAAACTGAGAGAATTGCAGCAGCAGCAGCGTTATTTGTGTACGGTTTA
ATCCCTCAGATATTTGCCTACGCCATTAATTTTCCGATTCAGAAATTCCTTCAAGCTCAG
AGCATTGTAGCCCCGAGTGCCTACATCTCCGCTGCAACGTTAGTGTTGCATTTGGGGTTG
AGCTGGGTGGTGATTTTTAAGATCGGGCTCGGATTACTTGGGGCGTCATTAGTGTTGAGT
TTGTCATGGTGGATAATTGTTATAGGCCAATTTGTGTACATTGTGAAGAGTGACAAGTGT
AAACAGACATGGAAAGGGTTCAGTTGGATGGCGTTTACCGGCTTGCCGGAGTTCTTCAAG
CTATCGGCGGCCTCGGCAGTGATGCTGTGCTTGGAGACTTGGTACTTTCAGATTGTGGTG
TTGCTTGCTGGCTTGCTTGAAAATCCTGAAGTGGCTTTGGATGCTCTTTCTATTTGCATG
TCAATTTCTGGTTGGGTCTTCATGATATCAGTTGGATTCAATGCAGCAGCAAGTGTGAGA
GTGAGCAATGAACTAGGAGCAAGGCATCCCAAATCAGCAGCTTTTTCTGTTGTCGTGGTT
ACATCGTGGTCTTTCATTCTCTCAATGATTGCTGCAGTCATCGTTCTTGCATTGCGTAAT
CTCATCAGTTATGCCTTCACTGAAGGTGAAGTCGTGGCTGAAGCTGTCTCGGATCTTTGT
CCATTGCTTGCGCTTTCCCTCATCCTCAACGGAATTCAGCCCGTCTTGTCAGGTGTGGCC
GTTGGCTGTGGATGGCAAGCCTTCGTGGCCTATGTCAATATAGGCTGCTATTACATTGTC
GGAGTTCCATTGGGTGTTCTTCTCGGCTTTTACTTCAAACTTGGCGCTAAGGGAATATGG
TCAGGAATGCTGGGAGGTACAGTGATGCAAACAATCATTTTAATATGGATCACCGCTCGA
ACTGATTGGAATAAAGAGGTGGAATCAGCTCAGAGTAGGTTGAAAATGTGGGATGACAAG
AAAGAATCAATTCTAGAGGAATAGATGAATTTAGGATGGACAAAAAGGAGGTTCATGCTA
AGGGATTTTCCCATGTTTTCTCTAACAAATGGGGTTTCCACAAAGCTAATAATGCAGTAA
TAATACCAATTTTTGAATGAAGATGATCAAGAATCAAGATTAATTATGAAGTTGATATAG
AAATTGTAGTCAAGGTCCAAAAAATATTTCCCACCCAATGCACCCATTTAAGATGTAACT
TGCCACTGATTTTTTGTTGTAATGATGGCTTCTTTGGACATAGGGAGATATGAGTATATG
TATGTTAATTATCTATACAAGTGGATGAACTAGTGAGGGAGTTTGAAGCTCAATTTCATT
ATTGGGTAACTATAGTAAATTCCTGTAATGAGCCAAGGATGGCACATGCCAAAGTCATGA
TTGAAATTGTCGCTTGTTTGAAATGTTTTGTTATGAAATAAAATTGTATCGTTGCTATTA
GTTAAATATATAATTTTTGACATGATGGTATCA
