Microarray Probes on PGSC0003DMT400022543
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_24354_PI426222305 |
JHI_St_60k_v1 |
CCGCTCGAACTGATTGGAATAAAGAGGTAAAACTCTTTAATTTTTCTAGTGCTTGTAATC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400022543
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400022543 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G21690.1 |
+1 |
0.0 |
636 |
345/492 (70%) |
MATE efflux family protein | chr3:7638750-7641861 FORWARD LENGTH=506 |
Transcript Sequence (1575 bp)
>PGSC0003DMT400022543 1575 pgsc_dm_v3.4
ATGGCTTCGCCGGAAAACGACATTTACCGGCCATTTCTACAAAACAATGTAACATCATTA
TCACCACAATTATCCGAAACTCACAATTTCGAATCAAGCAACGAGCTCGAAACTGTGCTA
TTGGACACTGAAATACCTCTCTGGAGTAAACTCCGATTAGCGACATGGATCGAAATGAAG
TTCCTCTTCTTCCTTGCTGCTCCAGCGGTTATGGTTTACATGATTAATTACATCATGTCT
ATGTCTACTCAGATATTCTCCGGTCACTTGGGTAATCTTGAGCTTGCTGCTGCTTCACTT
GGAAATACTGGGATTCAAGTCTTTGCTTATGGTCTTATGTTGGGCATGGGAAGTGCAGTG
GAAACACTATGTGGTCAAGCATTTGGGGCAAAGAAATACGATATGCTTGGAGTTTATCTT
CAAAGATCGACAGTTCTGTTAACTCTAACAGGAATTTTACTCACCATAATGTACATTTTC
TGCAAGCCGATTCTAATATTTCTAGGCCAAACTGAGAGAATTGCAGCAGCAGCAGCGTTA
TTTGTGTACGGTTTAATCCCTCAGATATTTGCCTACGCCATTAATTTTCCGATTCAGAAA
TTCCTTCAAGCTCAGAGCATTGTAGCCCCGAGTGCCTACATCTCCGCTGCAACGTTAGTG
TTGCATTTGGGGTTGAGCTGGGTGGTGATTTTTAAGATCGGGCTCGGATTACTTGGGGCG
TCATTAGTGTTGAGTTTGTCATGGTGGATAATTGTTATAGGCCAATTTGTGTACATTGTG
AAGAGTGACAAGTGTAAACAGACATGGAAAGGGTTCAGTTGGATGGCGTTTACCGGCTTG
CCGGAGTTCTTCAAGCTATCGGCGGCCTCGGCAGTGATGCTGTGCTTGGAGACTTGGTAC
TTTCAGATTGTGGTGTTGCTTGCTGGCTTGCTTGAAAATCCTGAAGTGGCTTTGGATGCT
CTTTCTATTTGTGTGAGAGTGAGCAATGAACTAGGAGCAAGGCATCCCAAATCAGCAGCT
TTTTCTGTTGTCGTGGTTACATCGTGGTCTTTCATTCTCTCAATGATTGCTGCAGTCATC
GTTCTTGCATTGCGTAATCTCATCAGTTATGCCTTCACTGAAGGTGAAGTCGTGGCTGAA
GCTGTCTCGGATCTTTGTCCATTGCTTGCGCTTTCCCTCATCCTCAACGGAATTCAGCCC
GTCTTGTCAGGTGTGGCCGTTGGCTGTGGATGGCAAGCCTTCGTGGCCTATGTCAATATA
GGCTGCTATTACATTGTCGGAGTTCCATTGGGTGTTCTTCTCGGCTTTTACTTCAAACTT
GGCGCTAAGGGAATATGGTCAGGAATGCTGGGAGGTACAGTGATGCAAACAATCATTTTA
ATATGGATCACCGCTCGAACTGATTGGAATAAAGAGGTAAAACTCTTTAATTTTTCTAGT
GCTTGTAATCATCCTGTTAGAAGTAGACAACATTTTTCCATAACACTATTTGGTTACAAA
ACTCCTTATGTTTATTATAAAGTCATCTCGTTACCTATCTACTTTAAGATCATTTCTTGG
AAAAGGTTGGCATAA
