Microarray Probes on PGSC0003DMT400022396
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_25697_PI426222305 |
JHI_St_60k_v1 |
GTCTTAGTGTAATGAGGGAGGAAAATAGTAAATTCTCAAAGTTTTAGCAAGTCCAGTGAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400022396
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400022396 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G55940.1 |
+2 |
7e-84 |
258 |
142/202 (70%) |
Uncharacterised protein family (UPF0172) | chr5:22656256-22657894 REVERSE LENGTH=208 |
Transcript Sequence (1186 bp)
>PGSC0003DMT400022396 1186 pgsc_dm_v3.4
CTTATTTTAAAATCATTTGTGACAATTTACACAAAATTTTCTCTGCGTAATGGGGATCGA
ATCAACGTACGAGATTCACCAAAACGCTTACATCAAGCTAATCCTCCATGCATCAAAGCA
CAAAACTTCCGCCGTCAACGGCGTTCTCCTCGGCCGTATCTCCGGTGACTCGGCCGTCGT
CGAAATTGTGGAGTCCGTTCCACTATTCCACTCTCAAATTGGCGTCCTTCCTCCTCTCGA
AATTGCCCTAATTATGATAGAGGAGTATTATTGTGATAAAGGTTTAAGTATTGTTGGTTA
CTTTCATGCCAATGAGAGATTTGATGATTCCGAGCTAGGAAGTGTTGCTAAGAATATTGC
AGACCATATCTACAAATATTTCCCTCAAGCTGCTGTGCTCCTGCTGGATAACAAGAAGTT
TGAAACTTTATCAAAAGAGGGGAAAGATAGGAGTCCTGTAATGCAGCTTTACACCAAGGA
TGCATCTAGGAGCTGGAAACTAGTGGGATCAGATGGAAGCAGCCGTTTGAAAATTAAACA
GCCATCAGCAAATGTCATCCTCCTAGATTACATTTCATCGGGGAAATGGAAGGATATTAT
AGATTTCGATGACCACCTTGATGACATTAGCAAGGACTGGGTGAACACAGAGCTCTTCAA
TTGAAGTTGCTATGTGTATCTCATTTTGTTTCCGTCTCTGAAGGGAAAGGATCCATCACT
TTGGTTATAACATTGTGATCCAATAGAAGGCAGCCTGCAGGTTATATTCTCAAGAAAAGG
CGATACATTTGTCAAAAGTGCTTCCAATTTTTTAGGAAGACTCGATATAACATGTTCTCC
AGCTTATTGATATTGCCCTGTGCCTAGTCCATCTCGATATTTTCTGTTTTTACCACTTCT
CTGATTTTCCATGAAATACAAGCAAGCAGAGTGATCTAGATTTTGCTCCACGTTTATTTT
GGTCCCCCTTATGTAGTTTCATGCACATCATTTAGTTATCGCGTTACTTCCCAACCCCAA
CTTGTTGGAACTGAGGCATCGTCGTTTTACTGTCTTAGTGTAATGAGGGAGGAAAATAGT
AAATTCTCAAAGTTTTAGCAAGTCCAGTGAAAAAAAAAGAGATGCTGAAATTTTACACTA
GTGTGATTGTGGAACTAATGAAAACATGATTATGGGATGAAATTCA
