Microarray Probes on PGSC0003DMT400022143
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_50688_PI426222305 |
JHI_St_60k_v1 |
GTGATATGTTTGATTACATACCAAAGGGGGATGCTATTTTCATGAAGTGGGTGCTAACAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400022143
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400022143 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G53140.1 |
+2 |
6e-175 |
498 |
248/349 (71%) |
O-methyltransferase family protein | chr3:19695692-19697355 FORWARD LENGTH=359 |
Transcript Sequence (1296 bp)
>PGSC0003DMT400022143 1296 pgsc_dm_v3.4
CATCCCTATATAACTAAAAAAAAATAAAACATATTAGTTTCCAAAAAACAAGGCCCAAAT
AAGTGTAGAAACTATGGAGAACGAAAATGGGGAATCAAGCAACAACAATAATAATGCAAG
ATTAGCTATAATGGAATTAGCTAACATGATAAGTGTACCTATGTCCCTTAATGCCGTTGT
TAAACTTAAGGTAGCTGATGCTATTTGGCAAAATGGATCAAATGCCCCACTCTCTCCCGT
TGAAATTCTAGCAAAAATCCGCGGCCCTCAGGGCGGCGGGGATGCTGAGAACCTTCAACG
AATTCTACGTATGCTCACAAGCTACGGTGTGTTCAAGGAGCATGTTGTTGATGACAGCTC
TCAAAGAAGATATTCATTGACTGAGGTGGGAAAAACCCTAGTCACGGACGAGAATGGCTT
ATCTCATGGCTCGTACGTGCTCCAGCACCATCAGGACGCGTTAATGAGGGCGTGGACGAT
GGTTCATGAGGCCGTTAATGATTCATCGATAGAGCCATTTGTGAAGGCAAATGGTGAGCC
AGCTTACAATTACTATGGAAAAAACTCAGAGATGAATAGCCTTATGTTAAATGCAATGTC
TGGAGTATCTGTGCCATTTATGAAGGCAATTTTAGAGGGATATGATGGGTTTCAAGGTGT
GAAAACACTTGTTGATGTTGGAGGAAGTGGTGGAGATTGCTTGAAGATGATTTTAGATAA
ACATACAAATATTGAACTTGGAATTAACTTTGATTTGCCTGAGGTGGTTGAAAAAGCCCC
ACAAATTCCTAGTATTAAACACGTTGGTGGTGATATGTTTGATTACATACCAAAGGGGGA
TGCTATTTTCATGAAGTGGGTGCTAACAACATGGACAGATGATGAATGCAAAGAAATAAT
GAAGAGTTGTTACATAGCACTTCCAGAGAAAGGTAAATTTATTGCTTGTGAGCCAGTTTT
GCCTCACCATACTGATGATAGCAAGAGAACTAGGGCACTTCTTGAAGGTGACATTTTTGT
CATGACTATTTACCGTGCCAAGGGCAAGCACCGTACTGAGGAAGAATATCGGCAGCTCGG
ACGAGCTGCCGGTTTCAACGATTGCAAGGGTTTTTACATCGATCATTTTTTTACGATTCT
TGAATTTCACAAGTCATGAATATAATTGTGAGATGTTAGTGGTATGAACGTAGTTCTGTT
TTAACATTAAAATAAATGTACGGTGTTGTAGTTGTAAAATAGAACTACGTTTTCTACTTT
ATATGAGGATGGAAGATTGGAGTATTTTATTTATCG
