Microarray Probes on PGSC0003DMT400022129
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_30758_PI426222305 |
JHI_St_60k_v1 |
CAAAAACATGATAGAAGAGAATCCTGGCAATTCCTTATTCTTGAGGAATTATGCCAACTT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400022129
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400022129 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G20190.1 |
+3 |
2e-32 |
125 |
56/106 (53%) |
Tetratricopeptide repeat (TPR)-like superfamily protein | chr5:6814093-6815171 FORWARD LENGTH=290 |
Transcript Sequence (1366 bp)
>PGSC0003DMT400022129 1366 pgsc_dm_v3.4
TAACTATTTCCCAATTTGTCCATAAGGTTTTCAAGAACTTTTGTGTTTGAGAAAGTTTGA
ATCTTGTTGTCTCTTGAATCAAGAAAATGTTGCTAAGGAGTTCTTCAACACCACTTCTTG
GATCTTTACACTCAGAGAGCCCCAACAGTCATCACCATCATCATCAGTCTGATTTAACCC
CAAATCACACACCCAATTCCATTCACCATAGTTATAGCAAACTCTCATGTAGCCATGGTG
GATATCAGAATTTCAATAGAAGTTTATACCCTTCTAACTCTCCAATCTCTCCTTCATTTT
CTGAGATCAGCAATGGCAACAAATTCCCATCTCATGGTTTTAGAAGAGCTCAATCTGAAG
GGAACTTGGAAGGATTAGTAAAAGTTTCAACTGATGAAGTAGTTGATGAATTTACCCTCT
CTAAACCAACCAAGACACTTTCATGTAAACCCCCAAAATCATTCTTGGAAACTATTCCAT
CTTTCTCCATTCACAATTCAAGGGAGCTTCATTCGGACGACGATGACAGTGATGAGGGAG
ATGACTTTGATTGCATCAGTGGACAGTACAGTTTGGGAATGAATGCTGTTAAAGGGGAAA
TGAGTTATGTGAGTCGAAATTCGAAGAAAGAAATAGTTGAAGGCAGAGAAGAGATGTTCC
TAGCAAGAGGACTTGGGGTTGCTGATATTGGTTGCTTTGATGATGGTGGCTGTGGCATAG
GAGGCGGAGGAGGCGGTGTTTATCGCCCAGTAGCGTTCGATAAGGATGGTGGTGACAGCC
AGGGACTACATATAGAAGAGCATTACAAAAACATGATAGAAGAGAATCCTGGCAATTCCT
TATTCTTGAGGAATTATGCCAACTTTTTATACAAAACAAAGAAAGATCTTAAAGGGGCAG
AGGAATACTACTCAAGAGCTATTTTAGCAGATCCAAGTGATGGTGAAGTTCTTTCACAAT
ATGCTAAGCTTATATGGGAGCTTCACCGTGATACAGATAGAGCCACAAGCTATTTCGAAA
GAGCAGTCCAAGCAGCCTCTACTGACAGTCACATACATGCTGCTTATGCTAATTTCCTCT
GGGAGATAGAAGATGAGGAAGATGAGAATGATGAAACGCAAACGCAACCAATGGTGCATA
CTGTAGCCACGGCTTCTATAACTGTTTGACTTGAAAGTACATTATCTTTTGTTGAAATAT
TTGCAGCAGAGTTAGTAGAAGCTTAGCAAGCAATTAGCAAGAACCTGTAATTTAGCATAT
AGTTAGTAATAAAACTGATGTACAGGACTTCTCTTTTTCTCATACTTTTATGATTGAATG
ACTAACCCTTAATAACAATGAATTGCCAGTGTAAACAATGGTGGAT
