Microarray Probes on PGSC0003DMT400022096
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_21227_PI426222305 |
JHI_St_60k_v1 |
GCATTGTGTTAATTGTATTATGGCTGCTTAATTCCTTCAATTATGGTCACCCTTTGGTTT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400022096
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400022096 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G14590.2 |
+3 |
0.0 |
737 |
364/643 (57%) |
Calcium-dependent lipid-binding (CaLB domain) family protein | chr3:4904448-4907741 REVERSE LENGTH=737 |
Transcript Sequence (2944 bp)
>PGSC0003DMT400022096 2944 pgsc_dm_v3.4
CTTTGAGACACGTGTATTCTACGTGCCACCTACAAATGGCAATTCAAAACTGGAACGAAA
ACTTCAAAAATACGGATCTCCAGCAATTCTCCAATTCTCTCGCCATGTTGTTCCAAAAAT
TTCTTGAAAAATTCGCCTGACCCGACCCGTTTTGACATTTTCAATTGCTTTCAAAATCAG
TTACTACTGTACTTTACTTACGTGTAAAAAAATGGAAAACCAAATTAATGGATAAACAAC
AATGCAATTAAAGAGTTAGGGGGTCATTATTAACTGTAATTAGTAAACAAAAAAGAGTTT
TTTTTTTCAAGATTTCTTAATGGGTGTGTTTACTTTTTATCAGTGACCCAAAAAAGAGTT
TTTTTTTTCAAGATTTGGTGATGGGTGTGTTTGTTTTTGATCAGTGACTTCAATAGGAAT
TAAAAAAGAGTTTTTTTTTCAAGATTTGGTGATGGGTGTGTTTATTTTTGATCAGTGACT
GTAAATAGGAATCAAAAAAGAGTTTTTTTGTCAAGATTTGGTAAGGGTGTGTTTGTTTTT
GATCAGTGACTGTAAATTGGGAATAAAAAGGGAGTCTTTTTTTTTCTGGGGTTGGAAGAT
TTTAAGAAATGGCAAGTATAACAGAGGTTACAATTCTACATCATGTGGGCATTGTGTTAA
TTGTATTATGGCTGCTTAATTCCTTCAATTATGGTCACCCTTTGGTTTATTTCATCTCCT
TAATCTATCTTTATCTGGTTAATGAGCAGTATGTAACTAGATTAAAGAAGAAATTGCAGT
TTGAGGAAAAAAGACAGTCGAATCAACGACGAGTACTTTCTGATTCTGAAACAGTGAGGT
GGTTAAACCATGCTCTTGAAAAGATTTGGCCTGTATGCATGGAGAATATCGTTTCACAGA
AAATTCTCCTCCCTATCATTCCGTGGTTTATGCAGAAATACAAACCTTGGACTGTGAAAG
ACATTGCAGTGCAGTCTCTCTACTTAGGAAGAAGCCCGCCTATGTTCACGGAAATGAGGG
TTCTTCGTGAATCTACTGGAGATGATCACCTTGTATTGGAGCTGGGAATGAATTTTCGTT
CTGCAGATGACATGAGTGCGATTCTTGCCGCGAAGCTGAAGAAGAGGTTGGGATTTGGGA
TGGTGACAAAGTTGCATCTGTTGGGAATGCACATTGAGGGAAAGGTCTTGATTGGTGTGA
AGTTCCTAAGGAAGTGGCCGTTTCTTGGTCGTATGCGGGTGTGCTTTGCTGAGCCTCCTT
ACTTTCAGATGACTGTAAAACCAATTTTTACACATGGGATTGATGTGACAGAACTTCCTG
GAGTTGCTGGATGGCTGGATAATCTTCTTTCTGTTGCATTTGAGCAGACACTTGTTGAGC
CCAACATGCTGGTAGTTGATATGGAGAAATTTGTCTCACCCCAACAAGACGAAAGCTGGT
TTTCTATCGATGCCAAGGAGCCCATTGCCCATGTTATTTTGGAAGTCCTTGAAGCAGAAG
ACTTGAAACCAGCAGATTTAAATGGACTGTCTGATCCATATGTTAAGGGGCATCTTGGGC
CCTACAGATTCAAGACTAGGACTCAGAAGAAGACATTAGCTCCACAGTGGCAAGAGGAGT
TCAAGATTCCAGTCTGTTCATGGGAGTCTCCTAACGATATGCTCAACATAGACGTTCGTG
ACAAAGACCATTTTTCTTCGGATGAAACATTGGGAGATAATGCCATAAACGTCTGCGATT
ATAGGGATGGCCAGAGGCATGATATATGGTTGTCTCTTCGTAATGTCAAAACGGGGAGAT
TACGTATTGCCATAACTGTAGTTGAAGGCAGCGAAAAGTGTACAGAGCAGTCATACGAGC
AGGCAAAAACGGACAACAAACAGGACAGCAATTCTGATGAGATGGATACAGCTGAAGGAG
GCTCCTTACCCACCGAGATGGATAAGCAATCGTCAAAAGTTGCAGATACATATGAACCAA
TTAACATAGAAGGGCAGAAGGAGACTGGCATGTGGGTACACCACCCTGGCAGTGAAGTAC
CACAAGTTTGGGAACCGAGAAAGGGAAAGAGTCGGGTTATCGATGGAGAAGTTCTTGGTT
CTGATGCTGATTCCATGGGAGGAAGTTTCAAGTTAAGAGGGGGAGGATCTACTCGAGGTG
ATGATTCTGATGAAGGCAGTGGATCTAAGAAGTCGAATCTAATCAACAGGGGTATAAATA
AGATCGGGTCCATTTTCCACAGAAGTCAGAAAAGCGAGGACAGGTCTGGAAATCTTGGAG
ATCCTGTTCCATCTCCGCAAGCTAATCTAAAGGCAGTGAGCGCAAAGGGGATCGGGGTTA
ATCTTATTATGAGCGATTCAGTGGAAACAACTCCCCGAGATGATAGTAAAGAGGCTCATG
AGGGATATGTTCAATGTAGTAGCACCAACAAGAGCAGAGTCCGCGACAAGGCAAAGAATA
TCCTAAGACATGCAGTATCTCGGAAGTCATCACGAAAATCTAAAGGTGAGTTAGAACCAA
CAGCATCAGAGAGAGATCTATCCGTGGAATCTGATTCCTCCTCTGATGATTTCACTCCCC
CAGTTGGTTCACCTCTAGGCCGTTCAGTTAGCGGTCGTTTCATAGCCAGCACTAGCATTG
AGAATCCCAATGGCAACACAGTGAAGAGTAGTGAATTGGTAGATGATAAGGGAAACATGA
AAACTAGTGAGGAAATAGTTCATGATAAAGCTATGAATTCAGCAAGTCCAAAAGTTTCAA
ACCTTTGAGGTGGAATGGATCAATGTGTTAAATGAATATGTTTGTTGTACATTTTTCTTA
ATGCTGAGTTACTGTTATAGCTTTTACTTGTACATGAATATATATATCATGTAATAGTTT
CATTTTGGCTTCTGTTAGTACATGTTGATCCTCTTTTTCTGTCAACAATGCATATACTTC
TTTG
