Microarray Probes on PGSC0003DMT400022093
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_21090_PI426222305 |
JHI_St_60k_v1 |
GCAAGTCCAAAAGTTTCAAACCTTTGAGGTGGAATGGATCAATGTGTTAAATGAATATGT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400022093
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400022093 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G14590.2 |
+3 |
3e-30 |
123 |
76/216 (35%) |
Calcium-dependent lipid-binding (CaLB domain) family protein | chr3:4904448-4907741 REVERSE LENGTH=737 |
Transcript Sequence (1213 bp)
>PGSC0003DMT400022093 1213 pgsc_dm_v3.4
TTTTCCAGATGATCCCATTAAATTAATTAGGCCTAGTGACAAGTACGCCATATATTTTTA
CCAACGAAAGTATAGATGGTTGAAAATTTATGTGTATTAATTTTCAGTGTACAGAGCAGT
CATACGAGCAGGCAAAAACGGACAACAAACAGGACAGCAATTCTGATGAGATGGATACAG
CTGAAGGAGGCTCCTTACCCACCGAGATGGATAAGCAATCGTCAAAAGTTGCAGATACAT
ATGAACCAATTAACATAGAAGGGCAGAAGGAGACTGGCATGTGGGTACACCACCCTGGCA
GTGAAGTACCACAAGTTTGGGAACCGAGAAAGGGAAAGAGTCGGGTTATCGATGGAGAAG
TTCTTGGTTCTGATGCTGATTCCATGGGAGGAAGTTTCAAGTTAAGAGGGGGAGGATCTA
CTCGAGGTGATGATTCTGATGAAGGCAGTGGATCTAAGAAGTCGAATCTAATCAACAGGG
GTATAAATAAGATCGGGTCCATTTTCCACAGAAGTCAGAAAAGCGAGGACAGGTCTGGAA
ATCTTGGAGATCCTGTTCCATCTCCGCAAGCTAATCTAAAGGCAGTGAGCGCAAAGGGGA
TCGGGGTTAATCTTATTATGAGCGATTCAGTGGAAACAACTCCCCGAGATGATAGTAAAG
AGGCTCATGAGGGATATGTTCAATGTAGTAGCACCAACAAGAGCAGAGTCCGCGACAAGG
CAAAGAATATCCTAAGACATGCAGTATCTCGGAAGTCATCACGAAAATCTAAAGGTGAGT
TAGAACCAACAGCATCAGAGAGAGATCTATCCGTGGAATCTGATTCCTCCTCTGATGATT
TCACTCCCCCAGTTGGTTCACCTCTAGGCCGTTCAGTTAGCGGTCGTTTCATAGCCAGCA
CTAGCATTGAGAATCCCAATGGCAACACAGTGAAGAGTAGTGAATTGGTAGATGATAAGG
GAAACATGAAAACTAGTGAGGAAATAGTTCATGATAAAGCTATGAATTCAGCAAGTCCAA
AAGTTTCAAACCTTTGAGGTGGAATGGATCAATGTGTTAAATGAATATGTTTGTTGTACA
TTTTTCTTAATGCTGAGTTACTGTTATAGCTTTTACTTGTACATGAATATATATATCATG
TAATAGTTTCATTTTGGCTTCTGTTAGTACATGTTGATCCTCTTTTTCTGTCAACAATGC
ATATACTTCTTTG
