Microarray Probes on PGSC0003DMT400022055
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_38367_PI426222305 |
JHI_St_60k_v1 |
ATTGAAACTTCTCATTTTCTTAGATCTTGCTCCCTCTGTGAACGCCACTTAATCCCCGGT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400022055
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400022055 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G78020.1 |
+2 |
2e-29 |
112 |
68/157 (43%) |
Protein of unknown function (DUF581) | chr1:29338787-29339491 FORWARD LENGTH=162 |
Transcript Sequence (913 bp)
>PGSC0003DMT400022055 913 pgsc_dm_v3.4
GTTTATCTTCCCACAAATATTTCCTCACACTCTCACTCCTACTCCTCCTCTACCTCTTTC
CTTCTCCTCCTTCTCTCTACCCCACCCTCCACCCTTCTTCGATATCGGTAGCAACTCTCG
CTGAAGCAATTATAGAAATTGTTACACTAATTGATTATGTACCTTTTACCATCTTGAGTT
TTGAATTCTCTTATCAACCTTGTCCAACTTCTAGCAAAGTAAGAAAACAAATTACCCTAT
CAATTTTTTATTTTATTTTTTAAAAATGATGCTAGGAAAGAGGGCAAGGCCACCAATAAT
CAAGAGAACAACAAGTATGACAGAATTCACCTTAGATCCTACCCTTAATTATCAACTTGA
TCATCATACTCCACGATCCAACGGTCAAGATCAAACCTTGTTATTGACTCGTAGAAAATC
AGCTGATTTCATTGAAACTTCTCATTTTCTTAGATCTTGCTCCCTCTGTGAACGCCACTT
AATCCCCGGTCACGATATCTACATGTACAGAGGAGATAGTGCTTTTTGCAGCCTAGACTG
TAGAGAAAAACAAATGAATCAAGATGCAAGAAAAGAAAAGTGTACTTCAAGTGCTACAAC
TAGGAAGAAATCTACAAATTCAGCCCCTTCTGTGGCAAGTGGGATGGGGTCCACCATTCC
GATGCCACAGGCTAGGCCATAACCGCCATGTGGATTATTACGCTGTTGAGATTAGAAGGG
AAAAAAGAGACAGTCTGATGTACTAAGTTCTGTTGATTTTTCAAATGCCCACTCTTCTAC
AAACTATAAAATCTATATATATGTATATAGATGCATGTGGGACTAAGATGACATATGAAT
GTGTAAATATTTTTCTATCAAATTTCATGAGTTTGGTGGTCAAGTTTTTCATTTTAATGA
AGGATTGATCCAG
