Microarray Probes on PGSC0003DMT400021568
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_41525_PI426222305 |
JHI_St_60k_v1 |
AAGTTGAATTGCCATTGTCATGCCAGTGAGACAGTGCTGTTGGAGTTCAAACAGTACACC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400021568
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400021568 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G26850.1 |
+1 |
6e-133 |
398 |
208/395 (53%) |
F-box family protein | chr2:11449369-11450889 REVERSE LENGTH=371 |
Transcript Sequence (1862 bp)
>PGSC0003DMT400021568 1862 pgsc_dm_v3.4
TCTTGCTCAAGTTTTATTCTTTTTGTTTAGTGATCAAATCATCTAAATTTTGTTCACCTC
TTATTTCTGGTGGGCAATTTATTGTAGTTGGATACCAAAACATTTAAGAAACAACTTCTT
TTTGTTGGTTGTTTTCATCTCTCTTTTTTTGTGGTTTTGTGAGTTTCAATAATTAAAGCT
TGTCTTGTGTGGTACATCTACCTATCTCCCTCATTTGAAAACTCAGCCAAAATTTTCACA
ATCTAAGTCATTTTTCTTTTTACCCTTTTCACTATATATATAAACTAGTTTCTTGCATTA
TCTTAGCTAAGTTAAAAAAGCAATCTTTTTTCTTTGAATGCAATGCTTGTTTTCTTGATT
TCTTGCTTTTCCTTCATCTTACTAGTTTCTAAGTCATTTTTCAAGCCAATGGGAGGTTTC
TCAAATGTATGGTTTAGTGAAGAACTTGTAAAGTTCTTAGCTTTATGGTTTAGTAAAGGT
AGAAATGCTATTAGTTTCTTGAATTCGCCACTTATGACAGATCATGTTAAGTCAAAACTA
GAGAATGTTGTGGAGAAAGAAGAGGGAGTTTCTTTACTGGATTTGCCTGATTTGACATTG
GAATGTATTTTTGAGAGGCTTCCACCAAATGGTCTTTGTAATATGGCTGCAGTTTGTAAT
TCTTTGAGAGAAAAATGTACAAGTGATCATTTGTGGGAGAAACATATGAAGGAAAAATGG
GGTGAATTGATTGGTTCTGCTGCTTATAAAGAATGGCAATGCTATGTTGTGTCAAGAAAT
AAAGCTTCCATCTTGGAGAAATCAAGAAAAAAAAAAGATCTTTATGGGAAATTTTCGAAG
ATTAGGAAACTTTTATGGAACAGATCAAAAGGAAATGAAGATGACAGCAAGGTTGGAAAT
TCTTCAGAAATGAGCTCAATTATGGATTGGTACCTCTCCCTTGAGACTGGAAAGTTTTGG
TTCCCGGCTCAGGTTTTTAACCGCGAGGTACAGAATGGACAAGTTGGTTTTATGTTATCT
TGCTATGATGCTGAAGTTAGCTATGATTCTAGAACAAATACTTTTAGTGCAAGGTATCCA
TCGTACGGGAGGCGAATAATAGAGGATGATATAGAATGGAATAGACTAAGAGCACCAACT
GTTGATACTCTTCCTTATGTTCTTCATGTATCAGATTGCTTAGATGATCTGAAACCTGAT
GATCACATTGAGATTCAGTGGAGAAAAAGCAAAGAGTTTGCATATGGTTGGTGGTATGGA
GTTGTTGGACACTCGGAATCTTGTAGTGGCAGCAAGTTGAATTGCCATTGTCATGCCAGT
GAGACAGTGCTGTTGGAGTTCAAACAGTACACCCCGGGCTCGAGGTGGAGGCAAACAGTG
ATAAACAGGAAGGATCACAGAGAAGTTGGCAATGAAGGAGATGGTTTTTATGGAGGAATC
AGAAAGCTTTATAGTGACAAAGAGATTTCATTGTGGAAAAGCCTCTTGCCTAACAGCATT
TTGGAATAGCACACAAACAAAAAGCATTGAAACTGTTCTCAGTGTAAATAGAAAGCAACT
TATGGATAGAGCACAATTAGGCTTTAGAATTTTTGCTCTGGTGTGTTCAAATGCATGTAC
ATACAAGACTGAAAGAGGTTGATAGAGCCTCGGGAATGGAGAAACTCTTGGTAGAAATTG
CGTCCCCTTTGGTAGACCTTACGATGTATTAAATTCGAATTAATCAAGCTAGTGAGTTTT
GGATACCGGATGCATAAACCACAAAAAAAGGGTGTTGTAAGAATATGTTTTCTATGCATG
GTAAAAAGTTCAGTAGTTATGAAGAGATGAAAATAAAAGCTTCTTTCTTATATCTGTTTT
TC
