Microarray Probes on PGSC0003DMT400021558
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_41510_PI426222305 |
JHI_St_60k_v1 |
GCATATTTTATCAAAGTCTAACAATGATCATGTGATCTGGCCTTGGACTAAAGTTCAGTC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400021558
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400021558 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G04090.1 |
+3 |
1e-67 |
219 |
123/228 (54%) |
small and basic intrinsic protein 1A | chr3:1072340-1074031 REVERSE LENGTH=240 |
Transcript Sequence (1322 bp)
>PGSC0003DMT400021558 1322 pgsc_dm_v3.4
ACGAAATATACTTCTAATTAATCTCTATTAGGTTAATCATCTCACTATCCTTCTTCTTCT
TCTTCCTCTCTTTCACCGAGTGGGAGAGATTTTCAGTTTTCAGAAGCTAAGAAAACTCAA
AAATTTCAAAGATTTTGTATTCAATGGGTGCTGTAAAAGCAGCTGTGGGTGATTTTGTTT
TGACATTGATGTGGGTTTTTTGTTCTTCCACTCTGGGGATTTTCACTTACCTTATTGCTA
CTGCTTTTGGGATTGCTCAAGGAATGGCTTCGCTATTTATTACTACTGTGCTTCTTTTTG
TGCTCTTCTTTGTCTTTGGGATTATCGGCGATGCTTTGGGTGGTGCCGCTTTTAATCCTG
CTGGTACAGCGGCGTTTTATGCTGCTGGGGTTGGAAAAGATTCTCTTTTTACCGTTGCCA
CCCGATTCCCTGCTCAGGCAGCTGGTGCGGTTGCTGGTGCAGTAGCAATATTGGAGGTTA
TTCCTACGCAGTACAAGCACATGCTTGGTGGGCCTTCCTTGAAAGTTGACTTGCACAATG
GAGCCATTGCTGAGGGCATCTTGACTTTCGTAATGACCTTTCTGGTCTTTATCATTGTAC
TGAAGGGTCCTAAAAGTGCACTTCTAAAGAATTGGTTACTTGCAATGTCAACTGTTACCA
TGGTAGTTGCAGGTTCAAAATACACTGGACCTTCTATGAATCCAGCCAATGCGTTTGGTT
GGGCGTACATAAACAACATGCACAACACATGGGAGCAGTTTTACGTCTACTGGATCTGCC
CCTTCGTAGGAGCAATATTGGCTGCATGGACTTTTCGTGCTGTCTTTCCAGCTCCAGCGA
AGAAGAAGAAGCCCCAGAAGAAAAAGCGAAATTGAGATAGACTCTTCTGCTTCAGTTACT
TCATTAATCTAGGTTGCGCTGTGGTTGAAGTAACCCGATAAAGTTGAAAGCAATTCTTAA
GTTCAAATACAGAATCATGACAGATTCCCTTCGCATTTGTTGGAATTGTTAATAAACCCC
CTTTCAACATTGATCCAAATTCAACCAACTATTAGTGCAAAAAACTTAGTTAACCAAAGT
TGGATGCCCTTGAATATGTTCTTATATGGTTCTTTAGATGCCTTCTTTCTGCTGTTTTGA
GTTGTGCTTGTGAATTAAATTTGGTGATTCTTTCTATAGTACTTGCATATTTTATCAAAG
TCTAACAATGATCATGTGATCTGGCCTTGGACTAAAGTTCAGTCTGGTGAAAGTTGGAAC
AATTTATCCAAAATTATCATTAAGGTGGCAAAAAAATGATTTGTTATATACATATCACCA
AG
