Microarray Probes on PGSC0003DMT400021557
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_41521_PI426222305 |
JHI_St_60k_v1 |
GCATATTTTATCAAAGTCTAACAATGATCATGTGATCTGGCCTTGGACTAAAGTTCAGTC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400021557
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400021557 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G04090.1 |
+2 |
3e-68 |
221 |
121/228 (53%) |
small and basic intrinsic protein 1A | chr3:1072340-1074031 REVERSE LENGTH=240 |
Transcript Sequence (1423 bp)
>PGSC0003DMT400021557 1423 pgsc_dm_v3.4
CCCAAATTAGCATGTTTTCTTCATGTAAGTAGTTTTCATTTGGTGGAGCACACCTTCCCC
AATTAACAATTCTTAATTAATTGTACAACAACATTAATCCCCAATTCCTACCTACTATAC
TTCTAAATTCTAACTAATCTCCATTTCTCTAATATATACCCATAATAATGCATTGATTGA
CATCTGAATCGCCGGCTTCTTCTTCTTCTTCTTCTTCGTCGTGTTGTTTCAGTTGAAGAA
GCAGATGGGTGTTGTAAAAGCAGCGGTAGCTGATTTTGTTATGACATTTATTGCGATATT
TTGTGTTTCAACGATTGGGGTTCTCACTTACATTATTGGATCTGCATTTGGAATTGCTCC
TGGATTGGCATCTCTCTCCATCACTATTGTCATTGTTTTCCTCCTGTTTTTAATGCTTAG
TGTTATAGCTGAGGCTTTGGGTGGCGCCGCCTTCAATCCTGCCGGTACGGCGGCGTTTTA
TGCTGCCGGAGTTGGAAATGATTCGCTCTTCTCCGTTGCTGCTCGATTTCCTGCTCAGGC
AGCTGGTGCGGTTGCTGGTGCAGTAGCAATATTGGAGGTTATTCCTACGCAGTACAAGCA
CATGCTTGGTGGGCCTTCCTTGAAAGTTGACTTGCACAATGGAGCCATTGCTGAGGGCAT
CTTGACTTTCGTAATGACCTTTCTGGTCTTTATCATTGTACTGAAGGGTCCTAAAAGTGC
ACTTCTAAAGAATTGGTTACTTGCAATGTCAACTGTTACCATGGTAGTTGCAGGTTCAAA
ATACACTGGACCTTCTATGAATCCAGCCAATGCGTTTGGTTGGGCGTACATAAACAACAT
GCACAACACATGGGAGCAGTTTTACGTCTACTGGATCTGCCCCTTCGTAGGAGCAATATT
GGCTGCATGGACTTTTCGTGCTGTCTTTCCAGCTCCAGCGAAGAAGAAGAAGCCCCAGAA
GAAAAAGCGAAATTGAGATAGACTCTTCTGCTTCAGTTACTTCATTAATCTAGGTTGCGC
TGTGGTTGAAGTAACCCGATAAAGTTGAAAGCAATTCTTAAGTTCAAATACAGAATCATG
ACAGATTCCCTTCGCATTTGTTGGAATTGTTAATAAACCCCCTTTCAACATTGATCCAAA
TTCAACCAACTATTAGTGCAAAAAACTTAGTTAACCAAAGTTGGATGCCCTTGAATATGT
TCTTATATGGTTCTTTAGATGCCTTCTTTCTGCTGTTTTGAGTTGTGCTTGTGAATTAAA
TTTGGTGATTCTTTCTATAGTACTTGCATATTTTATCAAAGTCTAACAATGATCATGTGA
TCTGGCCTTGGACTAAAGTTCAGTCTGGTGAAAGTTGGAACAATTTATCCAAAATTATCA
TTAAGGTGGCAAAAAAATGATTTGTTATATACATATCACCAAG
