Microarray Probes on PGSC0003DMT400021429
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_47385_PI426222305 |
JHI_St_60k_v1 |
CTGCTTCGGCTGCCATATCTAGATTCTTCCATAATTCAAAAATTAGCTTACATAACAGTG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400021429
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400021429 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G46295.1 |
+1 |
2e-09 |
52 |
24/55 (44%) |
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G06475.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:18779904-18780119 REVERSE LENGTH=71 |
Transcript Sequence (471 bp)
>PGSC0003DMT400021429 471 pgsc_dm_v3.4
GTTTCATTCCAAGAGGGAACAATGAAAATGAAAGCTGGTGGCTATTCCTTCTCGTTCAAG
AGACTAAGTAAGAAGGCAGTCGCCGGAACTGTTGGTTCTGAAGTAGGTACTCATGCCGGA
GATCATCATGATTCCTTAACTCAGCCCCCACCGCCGCCGCATCGGCAGTCGTCGTTACGG
TGGCGATTCAAAAATATGTCTTCTGGATTGAGGTGGAAGAGTAAAAGGCTTTACAAATTG
CGATACTGGTTCGTTGATTGCTTACTCTTCAAAATCATTTCTGTATTTGAAGCCATTTTT
CTCGTCTCTGCTTTGGCTTTCTTCTACCTCTGCTTCGGCTGCCATATCTAGATTCTTCCA
TAATTCAAAAATTAGCTTACATAACAGTGAAGAAATGTTGAAATTAGATTTATTTTGTTG
AGGTTTATGTAATGATTAATCGTATAGAGAAAGTTAGTGGACTAATTTGCG
