Microarray Probes on PGSC0003DMT400021311
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_20474_PI426222305 |
JHI_St_60k_v1 |
ACTGAGGGAGAAATCACCTGATGATTTTGATGGTAGCTTGCCTACCAACTTCAAGGAATA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400021311
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400021311 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G34410.1 |
+1 |
6e-28 |
110 |
83/190 (44%) |
redox responsive transcription factor 1 | chr4:16451992-16452798 FORWARD LENGTH=268 |
Transcript Sequence (923 bp)
>PGSC0003DMT400021311 923 pgsc_dm_v3.4
AATTTTCTCAGCTTTTTCAAATTTTCAACAATGCAGAGGTCAACTAAACTCACTGATGAA
CAAGAGTTTTCAATCATGGTTAATGCTTTAACCAATGTGATTACAGGTACTACCCATACT
TTTCCTGTCACTCCCAGTGCCACTATTTCATTACCTTCTACGAGTATGTCTTATTCTATT
GAGCCGCCCCAGTTTCATGTTGCGATAGAACCAGAGCGTTGTCAATTCTGCAAAATAAAT
GGTTGTTTAGGCTGCAATTATTTTGCAACCTCATCAGCCGCGGCTGGTGTTAACAACTAC
AATACATTAAACATTGTTGCGAAGAAGAAGAATTACAGAGGAGTGAGGCAGAGACCACGG
GGAAAATGGGCTGCGGAAATTAGAGACCCGAGAAGGGCAGCCAGAGTATGGCTTGGAACA
TTTACTACAGCAGAAGATGCAGCTAGAGCTTATGACAGAGCAGCTATTGAATTTAGAGGT
CCAAGAGCTAAACGTTAATTTCTCATTTTGCAGATTACACATCAATTCAACAACACAACA
ATACACCCCTGCAAGTGCAACAACAACAATCACCGCCCTCGCCCTCGCCCTCGCAGTTAC
AAAAGGGAATGAACACAGAAGAAGAGTTCTGGGATGAATTGATGAATTCGGACAATGAAA
TTCAACATTACTTTAATGGAGAATCTTCTAATTCTGCCAATGCCTATATTGCTCATAGCT
TCTGATCATTTCCTATTTTATAGCGAATACGACGCATATTGCATGCCCATTTAGTTTCGA
TAGTATCAAATTAAATTTGCTTTTCAATTAAGATAGTATGATAAATACTTAGGCACAAAA
TATTACATATGTGGCCTGAGAAAACTGAGGGAGAAATCACCTGATGATTTTGATGGTAGC
TTGCCTACCAACTTCAAGGAATA
