Microarray Probes on PGSC0003DMT400021142
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_23794_PI426222305 |
JHI_St_60k_v1 |
GCTGTTTAATGCCGTGCAATGCTTTCTGTTACATTTTGTTTTTCTTTAAACAGAAATGGC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400021142
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400021142 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G12020.1 |
+2 |
2e-45 |
153 |
96/149 (64%) |
17.6 kDa class II heat shock protein | chr5:3882409-3882876 REVERSE LENGTH=155 |
Transcript Sequence (843 bp)
>PGSC0003DMT400021142 843 pgsc_dm_v3.4
GAAGCTCCTAGAAACTCTCCTCATTCTTCTTCGATCCACCTCCAGAACATTCCACATTTC
CACTATATAACCCTAACCCCTCATTCCAAAATTCACTGCAATTTGAAATCAAACCAAAAT
TAAAAAAATTTCTCAATACTGAAAAAAAATGGATTTGAGGTTGCTGGGTATCGATAACAC
ACCACTCTTCCACACTCTCCAGCATATGATGGAAGCTGCCGGTGAAGATTCCGACAAGTC
GGTCAATGCACCATCAAGGAACTACGTTCGTGATGCTAAGGCCATGGCTGCTACACCAGC
GGACGTGAAGGAGTATCCTAATTCGTATGTTTTTGTTGTGGATATGCCAGGGTTGAAATC
TGGAGATATTAAAGTGCAGGTGGAAGAAGACAATGTGCTGTTGATTAGCGGAGAAAGGAA
GAGGGAAGAGGAGAAAGAAGGGGCAAAGTTTATTAGGATGGAGAGAAGGGTTGGGAAATT
CATGAGGAAGTTTAGTCTGCCGGAGAATGCGAATACTGATGCGATTTCTGCTGTTTGTCA
AGATGGAGTTCTGACTGTTACTGTTCAGAAATTGCCCCCTCCTGAGCCAAAGAAACCAAA
ATCAATTGAGGTGAAAGTTGCTTGAAGTTATGGACTCTGTTTTGATGGTTGGTGGGGTAT
GATGTAGTAGAAATAAAGATGGTAGAGATGTAGAAGTCGTGTTGTTTTACTCTTTCTGCT
ATGTTTTCAAGTTTGCTTTCAAGTTTGCAATGTGAGGTTACAATACTGGGTATTGTTTGT
TTTGCTGTTTAATGCCGTGCAATGCTTTCTGTTACATTTTGTTTTTCTTTAAACAGAAAT
GGC
