Microarray Probes on PGSC0003DMT400021082
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_23096_PI426222305 |
JHI_St_60k_v1 |
GCTCCTTTACTCAGGATCAAAGAGTTTGTAAGAGCTTATGGAGGCAACTTTGCTGCCAAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400021082
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400021082 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G04040.1 |
+3 |
0.0 |
1032 |
570/822 (69%) |
Patatin-like phospholipase family protein | chr5:1090346-1093003 FORWARD LENGTH=825 |
Transcript Sequence (2994 bp)
>PGSC0003DMT400021082 2994 pgsc_dm_v3.4
GTCACTGTTTGAACTCTACTAGCACATGTTTTAGTGTTTAGTTCTTGATTCCATCTGATT
TTGCCTAAATCTTGTGAATAGTTTTCTTCATTTTCTTAATCTTAGTAGTTGTTTACAATC
ACTAAGCTATGGATATAAGTAATGAGGCTAAAGTAGAGTTCATTTCCATAGGACCTTCTT
CAATTGTAGGTCGAACAATAGCCTTTCGAGTTTTGTTTTGCAAATCAATATCGCGGTTGA
GGCACAACATTTTTCATTTCTTGATATATTACTTGTACAAGATCAAGAATTGTCTGTCAT
ACTACTTGACACCTTTGATCAAATGGTTTCACCCGCGTAATCCACAGGGGATATTAGCAT
TAGTAACACTTCTAGCCTTCTTGTTGAGGCGATATACGAATGTAAAAATCAGGGCTGATA
TGGTTTATAAGAGGAAATTTTGGAGGAATATGATGAAATCTGCATTAACTTATGAGGAAT
GGGCTCATGCTGCGAAAATGTTGGAGAAAGAGACACCTAAAATGAATGAAGCAGAGTTTT
ATGATGAAGAGTTAGTTGTAAATAAACTTCAAGAACTTCAACATCGTCGTAATGAAGGAT
CTTTAAGAGATATTATGTTCTTTATGAGAGCTGATCTTGTGAGAAATCTGGGTAATATGT
GTAATCCACAGCTTCATAAGGGTAGGCTTCATGTGCCTAAACTTATTAAGGAGTATATTG
ATGAGGTTTCAACTCAGTTGAAAATGGTATGTGATTATGATTCAGATGAGATTTTGTTGG
AGGAGAAGCTTGCTTTTATGCATGAAACAAGACATGCTTTTGGTAGGACAGCATTGCTTT
TAAGCGGGGGCGCGTCTTTGGGAGCTTTTCATGTTGGTGTGGTTAAGACATTGGTTGAGC
ACAAGCTTATGCCAAGGATAATTGCTGGTTCGAGTGTTGGATCGATTATGTGTTCTGTAG
TTGCAACTCGGTCTTGGCCTGAGCTGCAGAGTTTTTTTGAGAATTTTTGGCATGTGTTGC
AGCCGTTTGAACAGATGGGTGGAATTCTAACTGTTTTCAGGAGGATCATGAGACAAGGGG
CTGTACATGAGATTAGGCAGTTGCAGGTGATGTTACGCCATCTCACGAATAATCTTACTT
TCCAAGAAGCTTACGATATGACTGGTCGAGTTCTAGGGATTACTGTTTGCTCCCCTAGAA
AACATGAACCTCCTAGATGTTTGAACTACTTGACTTCACCTCATGTTGTTATATGGAGTG
CTGTGACTGCTTCTTGCGCGTTTCCTGGTCTGTTTGAAGCTCAAGAACTGATGGCAAAGG
ATAGAAGTGGTAATCTTGTTCCTTATCATCCACCATTTCATTTGGAACCTGATCAGGCTG
CAGCTTCTGGTTCATCTGCTCGTCGATGGAGGGATGGTAGCTTGGAGATCGATCTACCTA
TGATGCAGCTAAAAGAGCTATTCAACGTAAACCACTTTATCGTGAGCCAGGCGAATCCAC
ATATTGCTCCTTTACTCAGGATCAAAGAGTTTGTAAGAGCTTATGGAGGCAACTTTGCTG
CCAAGCTTGCTCATCTTACTGAGATGGAAGTGAAGCACAGATGCAATCAGGTACTGGAAC
TTGGTTTTCCCTTGAGGGGATTAGCCAAGCTATTTGCTCAAGATTGGGAAGGCGATGTCA
CCGTTGTAATGCCAGCCACTCTTGCTCAGTACTTGAAGATCATACAGAATCCCTCTACTT
TGGAGGTTCAAAAAGCAGCAAATCAAGGGAGGAGATGCACTTGGGAGAAACTATCAGCCA
TTAAGGCAAATTGTGGAATTGAGCTTGCTCTTGATGAGTGTGTAGCAATACTCAACCATA
TGCGTAGACTAAAAAGGAGCGCGGAGAGAGCAGCTGCTGCTTCACAAGGCATGTCAAGCA
GCACAGTCAAACTCAATGCTTCTAGACGTATTCCTTCTTGGAATTGCATTGCAAGAGAGA
ACTCAACAGGCTCCCTTGAAGAAGACTTTCACGCGGATGCTTCTTCCTCTCTTCATCATC
ACAATGCTGGTCGAAACTGGCGTTGTAATAACAAGAATGCTGCACATGATCATCATGGTA
GTGACAGTGAGTCTGAAAACGCGGATAATAATTCTTGGACAAGATCAGGTGGTCCATTGA
TGAGGACAACATCAGCTGATAAGTTTATTGACTATGTACAAAACTTGGAAATGCATCCTT
CACAACGATCGAGCAGAGGACTGAGTATTGACCTCAACAATGTTGTAGTCAGGGAGCCTC
TTTCTCCGAGTCCACGAGTGACAACACCTGCTAGGAGATCAGATACAGAATTTGATCAAA
GAGACATCAGAATTATCGTCGCTGAAGGTGATTTACTACAGACTGAAAGGACTAACAATG
GGATTGTATTCAATGTGGTAAGGAGAGGAGACTTAACTCCATCAAACAGGAGTCTTGATT
CAGAAAACAACAGTTGCTTTCATGATCCAGTGGCCGAATGCGTGCAACTCGAAAATCCTG
AGAAGGATATGGATATAAGTTCAGCATCAGAAGATGGAGAAAATGCAGTACTAGATGAAG
TAACAAAAAATCAGATCATATAAGATATGACATGTTGTGTAAAGAATCCTTATACTATCA
GTGCAGTTTAACTGGTTATAACCGGTTATTACTCTAATTTTATCAGGTTATCATATCAAG
TCTCATATGAAGAGTTATTTGTTGTTGTAGGACAACTTAACCTGATAACGTATTAGTTCT
TTCCACATGGTCTAACTCATAAAGCTTTTTCTAACAACTACTTTGACATGTTTTTTTTTT
TTGGGAATAATGTAGTTGGATTTGTGGTTGTCTTTTTAGGGTATTATGTTGACATATATG
CTTGTGGATGTTAGAACTAGACAATGTATTTAAAGCTATGAGAAGCTATATAGTCCACTT
ATTGTGATGTTATGCATATACTTTCTCATTGGAAAAGTGGTTTGGCTAGTGCTG
