Microarray Probes on PGSC0003DMT400020700
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_29052_PI426222305 |
JHI_St_60k_v1 |
GCACAACGGAAAAAGGTCAGAAATGCTCTTAATTTTTCATTAAACACGCGACCTTTATTT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400020700
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400020700 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G19184.1 |
+3 |
1e-57 |
192 |
110/220 (50%) |
AP2/B3-like transcriptional factor family protein | chr3:6637555-6639035 FORWARD LENGTH=277 |
Transcript Sequence (1141 bp)
>PGSC0003DMT400020700 1141 pgsc_dm_v3.4
GCTCAAAAGAACTCTTTTTGTTTTCTTCCATCTCTTGTGTAAGATTACCTTTTGTTTTCA
TCAAATCGAAAAGAAAAATGGTGAAATATGAGGATTTGCGGAAGCAGAGATTGGAAGAAA
ACAAGAAAAGAATGGAAGAACTTAATCTTCCTCTGCTTACTCAAGCTCTCAAAAATTCAA
CTTCCCCCAAAACTACTCCTATGAAGAAAACAAAACCTCGGATTGTCGGAACAGAGCTAG
TTGCTGTGCGAAGATCACCTCGTGTAGCTAAAAGCCCTGCTCCTGAATACAAAGAAGTGA
TTCATTATGAAAGAGTGATGATACCAAGAAGGTTGGCTACACCAACGAAGAGGGATAGGT
TGTTTTTTGCGTATGCTTCGGACGAAGAAAGAGCTGCTTCGATAGAGAAAGCTGAGAAAC
TTGAAGCAAGTCTTGGATCAGAGTATCCTATATTAGTTAGACCAATGCTTCCCTCTCATG
TTTCTGGAGGTTTTTGGCTGGGTCTCCCATCGAATTTCTGCAGGAAGAACCTTCCAAGAA
GAGATGACACTATCACCTTAATAGATGAAACAGGAGAAGAATGGCCAACTGTATACTTGG
CTCAAAAATGTGGACTTAGTGGTGGATGGAAGAGGTTTTCTGTGGATCATGACTTGGCCG
ATGGAGATACAATCGTGTTTCATTTGATTCGTCCAACAAAATTCAAGGCATATATCATAA
GAGTAAACAATGCCAACGAGACTGCAAGTACTGAAATCTCAACCTCAACCTCAACCTCAA
GCAGTGAAGCCTTTTGAAAATCCAGGAGAAGAGAATGTTGCTGCTACGCGTTATGTGGCT
TCTCTGTCTCATATTTTGTCCGACATGTTTTTAGTAGATCTAAACAACAACATTGGAGGT
GATTTTGATCTAGAAACAAGTCATTGGTAGATTAGTACATAAAATCCAGGAATGATAGTT
TTGATGTTGCAAGTTGAACTTGTCCTCCAAAAAAATGCCAATTTTAAGCCTAGTTATTAT
GTTTTCGCATATACTTTCTCCATTGTTTAACATTGCACAACGGAAAAAGGTCAGAAATGC
TCTTAATTTTTCATTAAACACGCGACCTTTATTTTAAAGGCTATTTTGGTCCCATAAATA
T
