Microarray Probes on PGSC0003DMT400020322
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_21175_PI426222305 |
JHI_St_60k_v1 |
AATATCCCACCACCAACGAAGAAACCAAAGGTTCGATCAGTTATGTCTTGTTACTTGGAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400020322
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400020322 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G06320.1 |
+1 |
2e-15 |
71 |
39/100 (39%) |
unknown protein; Has 24 Blast hits to 24 proteins in 10 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). | chr1:1930602-1931449 FORWARD LENGTH=195 |
Transcript Sequence (423 bp)
>PGSC0003DMT400020322 423 pgsc_dm_v3.4
ATGCAAATGGTGGAAAGTAGATTCAGAATGAAAAAGAAATCACAGAAGATGACCTTAGAG
AAGTACGTCGATTTCATTGACAGCAACAAGCAATTCGATCTCACTATCCCTAATCTCAAT
GAGAAAGTTCTGGCCGACGCTGTGAACACAATAGAGTTAATGGACCTGCGACGCTCCACA
TTGCAAGAGGAGATCTCATCAGAAGCGTTCGTTACTCTCGATGAAGCAATCAGAGACCTC
ACTCATCTCAATTGGCAAGAGTGTTGTGTCACCTCTCTGCAAACCATTTGTTTCTCTAAT
GGAGTCAATGGCTCAGATCACTGCCAGGCGAAGACTAATGCGTCAGCTTCTTCAATGCCG
AATATCCCACCACCAACGAAGAAACCAAAGGTTCGATCAGTTATGTCTTGTTACTTGGAA
TGA
