Microarray Probes on PGSC0003DMT400020227
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_21162_PI426222305 |
JHI_St_60k_v1 |
CCCTTTACTGAAAGGGCACACATTTAAAATTCAGCTTCTGGTAGCATAAACTTTAGATTA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400020227
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400020227 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G25620.1 |
+1 |
2e-114 |
348 |
187/356 (53%) |
DNA-binding protein phosphatase 1 | chr2:10903154-10904978 REVERSE LENGTH=392 |
Transcript Sequence (1635 bp)
>PGSC0003DMT400020227 1635 pgsc_dm_v3.4
CTTGATTTATCAATTTCCAGCTGACCCCTTTACATATTCCAAGAATCTTCTCATCGAAAT
TTCAATTCTTGATATTCTCTATTCCTTTACAAAGCTTTCAGCAACTTTTTATCACCTAAC
AACTTGCAGAAAATAAAGAGAAAAAAAATATATATACCATTTTTTTTCCTGTTAAAACTG
GTATAAACAGTAATGTGTGTGCAAGATTCAGAGGAAGTGAGTGAGGATATGGAGAATTTG
GACATTTCCAAGACTGATTGCAGTGAAAAGATCAGATCTTTACAAATAGAAAGTGAATTC
CCAAATATCCATAAAGAGAAATTTGAAAAAAACTCATCTTCTAGCTATGCTGTGATGAGA
AATTCATTCCCAATGGAAAGTATATCTGAGGATACGACTATTGCAGACCGTCAGCATATA
CTCTACAATAAATTCCTCCCAACTCTTAGGTCCGGAGAGTGGTCTGATATTGGAGGCCGT
CATGATATGGAAGATACTCACATCTGTATTGCAGACATGGCTAAGAACTTTGGTCATAGT
ATTAGTGGTGAGGAAGCTATCTCCTTCTATGGATGACAGGTCTTTGATGGACATGGTGGA
ACGGGAGCAGCACTATTTGTACGCGACTGCTTACCAAGAATCATCGTAGAGGATGCAGAT
TTCCCTTTGAAGCTCGAAAAAGTGGTCAGTAAATCTTTTTTGGAGACCGATGCTGCTTTT
GCCAATTCATGCTCCCTCGATTCTGCCTTGTCCTCAGGCACAACTGCACTCACTGCTATG
ATATTTGGAAGATCATTACTCGTGGCAAATGCCGGTGACTGTCGAGCTGTTCTCTCTCGA
GGTGGACTGGCTATAGAAATGTCAAAGGATCACAGACCTTGTTGTGTCAATGAAAGAACA
CGTGTTGAGTCCTTGGGTGGATTTGTCGATGATGGCTATTTGAATGGACAGTTGGGTGTG
ACCCGAGCACTGGGTAACTGGCACATCAAGGGACTGAAGGAAGTTGATAAAGGTGGTCCA
TTGAGTGCTGAACCTGAACTAAAACTGCTTACGCTGACTAAGGAGGACGAGTTCCTGATC
ATCGGCAGTGATGGAATTTGGGATGTTTTCAGAAACCAAAATGCAGTGGATTTTGCCCGG
AGGAGACTGCAAGAGCACAACAATGTGAAATTATGCTGCAAGGAAATAGTAGACGAGGCC
AAAAAACGCGGTGCCATAGACAACTTAACAGTAGTCATGGTATGCTTTCATTCCGAGCCA
CCACCACCTATCGTATTCCAAAGATCAAGAATCAGGAAGTGTATCTCTGCCGAGGGGCTT
CAGAATCTGAAATCTTTACTCGAAGGGTAGAGCTATCGCGTACAAAAAATTTAACTATGG
CAGCAGTTGAGAACGAATTCGACTTTGTAAACTATCTCTGAGGTAGACCTTGTAATGTTC
CAATTTAGAACTGAAGCAGATGGAATAAAAGCTTGAGGGAGAAATGAGCAAGCCATTGAA
CCAAAAATTTGTAAATAATTCATTCTTCAATTGTATGCACCCTTTACTGAAAGGGCACAC
ATTTAAAATTCAGCTTCTGGTAGCATAAACTTTAGATTATCATTGATTAATATATAGTTA
TATACTACTTCATTG
