Microarray Probes on PGSC0003DMT400019985
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_48721_PI426222305 |
JHI_St_60k_v1 |
CAGCTAAGCTAACAGTGGAATCTGTTGAGACAGTCAATAATCTCATCTCATGCACTCTCC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400019985
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400019985 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G00730.1 |
+1 |
0.0 |
887 |
487/776 (63%) |
Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein | chr4:299741-304103 REVERSE LENGTH=802 |
Transcript Sequence (2313 bp)
>PGSC0003DMT400019985 2313 pgsc_dm_v3.4
ATGAATTTTGGGGATTTTCTTGACAACAGTATTATTGGTGATGGTAATGGTGGTGGTGCA
AGAATCGTTACGAATAGCAACAACATGAGAAGCAACAATAACATGTCAATTAGTACAAAT
TTACCATCACTTGCCAAGTCGATGTTCAACTCTCCTCGACTCTCTCTTGCACTTCAAACA
GGAAGGGAAGGTGGCCCCGGTGGAGTTGCAGTAATGGCTGAAGAGAACTACTACGAAGCT
AATGATAATAATAATAACATTATTGGTAGAAGAAGTATAGAGAAAGAGCAAGCTGAAAGT
AGATCTGGAAGTGAAAATTTGGAAGGTGCTTCTGGAGATGATGAAGATGACAAACCACAA
CGGAAAAGGAAAAGATACCACCGACACACTCCTCAACAAATTCAACAACTTGAATTACTC
TTTAAGGAGTGTCCTCATCCCGATGAGAAACAAAGGATGGAATTGAGTAGAAGACTTTGT
TTAGAGACAAGACAAGTTAAGTTTTGGTTCCAAAATCGTAGAACACAAATGAAGACCCAA
CTCGAACGCCATGAGAATTCGTTTCTACGACAAGAGAACGATAAACTTCGAGCTGAAAAC
ATGTCGATAAGAGAGGCTATAATGAATCCAATTTGCACAACCTGTAGTGGTCCAGCAATA
ATTGGTGAAGTATCTTTTGAAGAACAACATCTACGGATCGAGAATTCCAGGTTGAAAGAT
GAACTCGATCGAGTTAATGCACTTGCTGGCAAATTCATAGGCAGACCCATTTCATTACCA
TTGCCTAATTCTACCTTGGAACTGGAAGTTGGAAACAATGGATTTAGAGCTAAACCTGAT
TTTGGTGTAGGAATTTCAAATCCGTTGCCAGTATTGCCTCATACGAGACAAACAACCGGC
ATTGAAATGTCATTTGATAGATCTGTGTATTTGGAGCTTGCTTTAGCAGCTATGGATGAA
TTAATTAAAATGGCAAAAACTGACGATCCTCTATGGCTAAGGAACAGGGAATTATGTGGC
GGAGAAGTATTGAATCATGACGAGTACATGAGGAAATTTACTCCTTGTATTGGTTTGAAG
CCGATTAAATTTGTTTCCGAGGGTTCCAGGGAGACCGGCATGGTAATCATCAATAGTTTG
GCTCTTGTTGAAACATTAATGGACTCGAACAAATGGGCAGAAATGTTTCCTTGTTTGATT
GCAAGTACATCAACAATAGATGTGATATCAAGTGGTGTTGGTGGAACTAGAAATGGTGCA
CTTCAGCTGATGCGTTCCGAACTACAAGTGCTCTCACCATTAGTACCCATCAGAGAATTC
AAATTCCTCAGGTTTTGTAAACAACACGCCGAAGGGGTTTGGGCTGTTGTTGATGTTTCC
GTTGATACTATAAGAGAAACAACGACTTTAGATGCAACGACATTTTCAAATTGCAGGAGA
TTGCCTTCTGGATGCGTAGTGCAAGATATGCCCAATGGGTACAGCAAAATTACATGGGTA
GAACATGTGGAATACGACGAGAGTGTAGTTCATCAGCTTTACCGTCCATTGATCAGTGCC
GGCATGGGCTTTGGTGCACAAAAATGGGTTGCTACCCTCCAACGCCAGTGTGAATGCCTT
GCAATCCTCATGTCATCCACTGTGCCCTCGAGGGATCACACAGGTAATAATGTGGAGGAT
TATGTTCGTGTTTTGACTCGAAAGAGTGTAGATGACCCCGGTGAGCCACCGGGGATTGTT
GTAAACGCTGCAACATCTGTTTGGTTGCCTGTTTCCCCACAAAGACTTTTCGAGTTTCTC
CGTGATGAACAGCTGAGAAGTGAATGGGACATACTCTCAAATGGTGGTCCTATGCAAGAA
ATGGCACATATTGCTAAAGGACAAGATCATGGCAACTGCGTCTCCCTCCTTCGTGCTAGT
GTGATGAACGCGAGCCAAAACATGTTAATTCTTCAAGAAACTTGCACAGACGCATCAGGG
TCGCTTGTAGTATACGCGCCAGTTGACATACCGTCAATGCATTTGGTAATGAACGGTGGA
GATTCTGCTTACGTGGCACTGCTCCCTTCAGGATTTTCCATAGTACCAGATGGGCCCGGG
TCTCGTGGGCCTAATTTGGTGAAAAGTCTTAATAATGGGCCTGGCCCAGGCCCAGATATG
AGAGTAAGTGGGTCCCTCTTAACTGTAGCTTTTCAAATATTGGTGAATAGCTTACCTACA
GCTAAGCTAACAGTGGAATCTGTTGAGACAGTCAATAATCTCATCTCATGCACTCTCCAA
AAAATCAAAGGAGCCCTACATTGTGAAAGTTAA
