Microarray Probes on PGSC0003DMT400019880
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_41697_PI426222305 |
JHI_St_60k_v1 |
ACTCGAATGAATGCTTTTGCTGCTATATTTACCCACGGGTTAGAGGAGTTTAAGATTTGA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400019880
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400019880 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G03940.1 |
+1 |
6e-74 |
243 |
151/461 (33%) |
HXXXD-type acyl-transferase family protein | chr1:1009542-1010951 REVERSE LENGTH=469 |
Transcript Sequence (1356 bp)
>PGSC0003DMT400019880 1356 pgsc_dm_v3.4
ATGGCTTCAATTGTTGAGCAATGTGAAGTTGCACCACCTTCATGTGCCACAGATAAGTTG
ACACTCCCTTTAACCTATTTTGATATGGTGTGGTTAAATAACCAACGTGTACCTAGGATT
CTATTCTATAAGCTCCCTATTGACAAAAATAGTTTCATCCAAAAAACTATTCCTACTCTC
AAACATTCACTCTCCCTGACTCTCAAACACTATCTACCACTAGCTGGTAACTTTGTTTGT
CCATTGAATTCGACCGATCATCCTGAATTACGTTATGTGAAGGGAGATTCTGTATCTGTT
ACTTTTTCTGAAACTGACATGGATTTTGATTATCTTGTTAGTAATGATCATCCACGTAAC
GCTAAGGATATTTATCACTTTGTTCCTCACTTGACGGAACCTAAGGATGTATTAGGGGTC
CAATTTGCACCGGTTTTAGCTATTCAGGTGACACTTTTTCCGAATCATGGCATATCTATT
TGTTTCATTAACCATCACATCGTTGGTGACGGATGTACTATAGTAGGGTTCATAAAGTCA
TGGGCTTTGCTGAATAAATACGGTGGAAATGATGAGTTCATGATGATTCCGTTTTATGAT
CGGTCTATTGTTAAAGAGCCTTATGGACTAAAAGGTTTACTATGGGATGAAATGAAAGAA
CATAAAAGTACTGCTGATCATGTAATTTTGACACCTCCTGATAACATAGTTCGAGGTACT
TTTATTATAACACGAAATGAAATTGAAAAACTCAAGAATTTAATATCGTCAAGACGACCT
AGCCTGACTCATGTAACATCATACACCGTAACATGTGGTTATGTATGGGCTTGCTTGATA
AAATCAGAGGATACTGATACTGATCATATAATAATAGATGACAATGTAATGGAATATTTC
TCATGTACGGTTGATTACAGAGCGCGATTTGATCCTCCACTTCCTTCATCTTACTTTGGG
AATTGTGTCGTCTGGTACATTGTAAAAACAAGGCATGTTGATTTAGTTGGAAATGAAGGC
TTTATAATCGCGGCAGAATCAATTGGAGAAACTATTCATAAAAGGAACAAGGATAAGGAA
TATGTGTTGAGTGGTGAGTGGTTGAACGAAGACGATCATCGATTTAAATCTCTTTCAGTT
GCTGGATCGCCAAAGTTTGATTTATACGCCACTGATTTTGGCTGGGGAAGGCCAGAAAAA
TGGGAATTCGTTTCTCTTCAAACTGGTATATTGATGTCTCTTATTAAGTCCAAGGACTCC
AATGGAGATTTGGAAATTGGTTTGTCTTTGCCTAAAACTCGAATGAATGCTTTTGCTGCT
ATATTTACCCACGGGTTAGAGGAGTTTAAGATTTGA
