Microarray Probes on PGSC0003DMT400019730
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_34164_PI426222305 |
JHI_St_60k_v1 |
CAATCATCTGAAAGTGAGCAACAAGGCATCAAGTCATCACTCTCTGGTGTCAATGGCTTA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400019730
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400019730 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G41430.1 |
+2 |
1e-32 |
120 |
75/169 (44%) |
dehydration-induced protein (ERD15) | chr2:17269736-17270314 FORWARD LENGTH=163 |
Transcript Sequence (876 bp)
>PGSC0003DMT400019730 876 pgsc_dm_v3.4
GATAAGACTTCATACGTGTACGAGTCGCTTCTGTAGTTGAAAGATATTTTCTTTTCGTTA
AGATAGCAATTTTGGAGAAAGAAGAATGGCTTTAGTTTCTGGAGGAAGGTCATCAACACT
GAATCCGAATGCACCTCTCTTCATCCCATCTTATGTGCAACAAGTGGAGGACTTTTCACC
TGAATGGTGGAATTTGGTAACAACTGCAACATGGTTCCGCGATTATTGGACGAGCCAGCA
TCAAGGAGAGGAATATGGCGATGATGATCTTGGGTTTGCTGGAAATGATGTTGCTGACTT
GCTTCCCGAAAACATTGATCTTGATGTCGATGAGGATATTTTGAATATGGAAGCTCAGTT
TGAAGAATTTCTTCAATCATCTGAAAGTGAGCAACAAGGCATCAAGTCATCACTCTCTGG
TGTCAATGGCTTACCCAAGGGTTCTGAGGCACTCGTAAGGACACTGAGCATGCCAAAGCC
AAAATCTCCTATTGAGCCTCCAAAGTTGTACGAGAAACCAGCAAAGATTGTTAGCCCAAA
GAACAGCCTTCGCCGCATCCAGCAGCCCCGCTAAATGTAGTTTAGCTTAAGCAAAAGTTC
TTTGTTTGTAGTTTGGGTGTATGTTAGTTCTTAATCTGCAGCTTTTAATCTTTGAAAAGC
AGCAATTGAGAAAGTTTCAAGAGTCTTTAGTTCTTGTTATCTTTTGTATAGAGCAAGGTA
GAGGTGGCACTTTTGTATCTAGCCTTGTTCATAGTTTTAGTATATCTTTTCATCAGTTTT
TTAACTTTGTAAACATCAAAACTTGTCCAAAGTGAAAAAAAATATATGTAAAAATCAGTT
GACAAAAAGAGCATGTCTTTTGAGTCTTATTTCTTG
