Microarray Probes on PGSC0003DMT400019584
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_37266_PI426222305 |
JHI_St_60k_v1 |
TCTGATCGATATGTTAAGAAGGGATTGTGGAAGGCCGGTGATTTCGAGTTGACTTCTAAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400019584
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400019584 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G79870.1 |
+3 |
3e-127 |
375 |
229/313 (73%) |
D-isomer specific 2-hydroxyacid dehydrogenase family protein | chr1:30044794-30045851 FORWARD LENGTH=313 |
Transcript Sequence (1390 bp)
>PGSC0003DMT400019584 1390 pgsc_dm_v3.4
GTTCAATCTTATAATACCAATTTAAGTGTCTACTTGGCACACCCATAGCTAGAGGACATA
GATGCAAGATGAAGCCAAGTTGAAGGACACGTTTATGTAGTATGGGTATATAATTCACAT
GATAATTGTACACGTTTTAGAGCCCAATCACTGAGAACCACCAAATTGTACTATCAAAAG
ATAAGTTAGTTATAAAGAATCAACACAGTTTCAATTCTTCTCAATCTTGCAGACACTTAT
AACTAATCTCATATAGAAGAAAAATGGAATCTATAGGAGTACTAATGGCATGTCCAATGT
CATCATACTTAGAACAACAACTCGATAATCGATTCAACCTCATACGTTACTGGAACTTCT
CCGACAAGAAACAATTCATCAACAACTACGCGCATTCAATACGTGCTGTTGTGGGCAACG
CTGCTGCTGGTGCTGATGCAGAGCTTATCGAGGCGTTGCCTCAGCTAGAAATTGTGACTA
GTTTCAGTGTTGGTTTAGATAAGATTGATTTGAACAAGTGTAAAGAGAAGGGTATTAGAG
TGACTAATACACCTGATGTGTTAACTGAGGATGTTGCTGATCTTGCTATTGGATTAATGT
TGGCTGTGCTTAGGAGGATTTGCGAGTCTGATCGATATGTTAAGAAGGGATTGTGGAAGG
CCGGTGATTTCGAGTTGACTTCTAAGTTTAGTGGCAAAAGAGTTGGTATCATAGGATTAG
GGAGGATTGGCTTAGCAATTGCAAAGAGAGCAGAGGCTTTTGATTGTCCAATCAGTTACT
ATGCGCGATCAGAAAAGGCAAATACAAATTACAACTACTATCCAACTGTAGTAGAACTGG
CTACCAACTGTGAGATCCTGGTTGTGGCGTGTGCCCTAACTCCTGAGACTCGTTACATTG
TCAACCGCGAAGTGATTTATGCATTAGGTCCAAAAGGGATTCTTATCAACATTGGAAGGG
GACCTCATGTTGATGAAAAAGAGATGGTATCTGCTCTTCTTGATGGTCGATTAGGGGGCG
CTGGCCTTGATGTGTTTGAGAATGAACCTGAAGTACCTGATAAGCTGTTTGGCCTTGAAA
ATGTGGTCTTGTTGCCTCATGTAGCTAGTGGTACAGAGGAGACACGCGAGTCGATGGCTG
ACATTGTCATTGGTAACTTAGAAGCTCACTTTCAGAACAAACCACTGTTAACTCCAGTAG
TTTAGTAATGTAACTAAGATTTTGGTTGTCATGGTTGTCTGGAGGGCTACATGTTGATGT
AAATTTTGGTTCCTTTGTTAAGACTCTTGCTAATCCCTGCGTTGTTAATCTCTGCATTAC
TAATCCATGCATTACTAATCCCTGTGTTATCAATGTTTGTATCAAACAACCCCTTAAAAG
TACATTGTCT
