Microarray Probes on PGSC0003DMT400019061
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_39515_PI426222305 |
JHI_St_60k_v1 |
GGAAATCATAACTAATATTTCAACTGTTTGTGTTAAAACTAGTCCCTCCGATCAAACCTC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400019061
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400019061 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G80840.1 |
+2 |
7e-56 |
189 |
121/281 (43%) |
WRKY DNA-binding protein 40 | chr1:30383834-30385356 FORWARD LENGTH=302 |
Transcript Sequence (1206 bp)
>PGSC0003DMT400019061 1206 pgsc_dm_v3.4
TAAAAACAAAAATAAAAGAGAGAAAAAAAAATTAAAATTAGATTCCATAGACACAAGTAT
GGGAAACAAGTCTTTTTTTATTGACCTTAACACAAACCCCTTATTGCACAACATCAATAG
AAGTCCGATACCGCGTGAGACATTGGATGAAGAATTGAGTAGGATGAGAAAGGAGAACAA
GAAACTAGCAACAACGCTAACAAGTTTGTGTGAGAAGTACAATTCTTTGCAAACTCATAT
AATTGAGTTGCAACAAAAATACTCCACTCATGAAGAAGACAACTCTAAATTATTATTATC
AAGAAAAAGAAAGGCTGAAGAAGAGTATTGTGTGAATAATTCATACATCAATATTGAAGA
AGCATCACCAAAGAGGCCAAGGGAAATCATAACTAATATTTCAACTGTTTGTGTTAAAAC
TAGTCCCTCCGATCAAACCTCAGTGGTGAAAGATGGATATAATTGGAGAAAATATGGTCA
AAAAGTGACAAGAGATAACCCTTCTCCAAGAGCCTATTTTAAGTGTTCATTTGCACCAAC
ATGCCCAGTCAAGAAAAAGGTACAAAGAAGTGTTAAAGATGCATCAATTTTAGTAGCTAC
ATATGAAGGGGAGCACAACCATCCTCAACCATCTCAAGCTGAAATAACAGTGCCATTAGT
CAATGCATCAGATCCAACATTTTTGAACAAATTTATGGAAGACATCAACACAAATTCACT
GCAACAACAATATTTAGTCGAACAAATGGCGTCTTCGTTGTCCAAGAATCCTAGTTTTGC
AGCTACAGTTGCTACAGCCATCTCAGGATTACTTTTTTGAATATGATTTATCTTTCAAAT
GACACAAAATTACTGTTTGTTGAGAGGATAAAATGGTCATTGTACTATTGGAGTAACATA
TTAGTTGTAGTTTTTAGTTAGTTGCTCATGAGATTTAGTTAGATAATAATGTATTAGTGT
AGAGAAACACCATGCGGTATATATTTTCTATTTGCTCTCTCAATCTTTAACTTCTTTGTT
ACTCAATGTTTGGTTTTGAATCTTTAAGCGTTAGCATTAGCTTTATGTATTAGTAGTACC
TTATTTGGTGTACTTTTTCATGTTATGTACATTAGTTATACGCTCTATTGTGTATTGGGG
AGTGTATTACTAATATCATGGATTTATAGGTATTAATAATACAAAAGATGCATTAGCATT
TTAAAG
