Microarray Probes on PGSC0003DMT400019058
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_39514_PI426222305 |
JHI_St_60k_v1 |
AATAGTTTTTCCATTGACCTTAACACAAACCTCTCTTTGCACAACACCAATACAAGTCCG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400019058
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400019058 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G80840.1 |
+1 |
1e-60 |
199 |
126/275 (46%) |
WRKY DNA-binding protein 40 | chr1:30383834-30385356 FORWARD LENGTH=302 |
Transcript Sequence (993 bp)
>PGSC0003DMT400019058 993 pgsc_dm_v3.4
AACTACTTCCACTTTTTTTCCTTTATAAATAATCCATTTTCCCATTTCTTCTCTTCATTC
TATTCAACAAAAAAAACAACACAATCAATAAGGACAATTTTTCTTATAGATTCAATGGAT
ACAAGTTTGGGAGACAATAGTTTTTCCATTGACCTTAACACAAACCTCTCTTTGCACAAC
ACCAATACAAGTCCGCGCGAGACGTTGGATGAAGAATTGATTAGGATGAGAGAGGAGAAC
AAGAAGTTAGTAACAATGCTCACAAATTTGTGTGAGAACTACAATTCCTTGCAAACTCAC
CTAATTGAGTTGCTGCAAAAATACTCTACTCATAATGAAGAGGACAATTCCAATTTATTA
TTACCAAGGAAAAGAAAAGCTGAAGAAGAGTGTTGTGTGAATAATTTTGAAGAAGCATCA
CCAAAGAGGCCAAGAGAAATCACAACCAATGTTTCAACTGTTTGTGTCAAAACTAATCGA
TCCGATCAAACCTCAGTGGTGAAGGATGGATATAACTGGAGAAAATATGGTCAAAAAGTT
ACAAGAGATAACCCTTATCCTAGAGCATATTATAAGTGTTCATTTGCACCAACATGCCCA
GTCAAGAAGAAGGTACAAAGAAGCATTGAAGATCCATCAATTTTAGTAGCTGTATATGAA
GGAGAACACAACCATCCTCATCCATCCCAAACTGAAATAACAGTACCATTAGTCAACCAA
GATGTTACAACAGATCCAACATTTTCTAACAAATTCATGGAAGATATTGACACAAATTCA
TTACAACAACATTTAGTTCAACAAATGGCTTCTTCCTTAACGAGTAGCCCTACTTTCACA
GCTGCAGTTGCTGCAGCCATCTCTGGAAAAATTTTCGAATATGATTTGCCTTTCAAATAA
AGAAAATTTACAGTTACTCAAATGGTTTCTCTTTCTTTATTGAGATCAAAATGAGCTTGT
TTGGACATACGATTTCATCTTATAATTTCAAAT
