Microarray Probes on PGSC0003DMT400019055
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_39521_PI426222305 |
JHI_St_60k_v1 |
GTGTGCTTTACTCATATTTTTCTCTTCCAACAGAGTTCAGGAATATGAAATCTATGTTGC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400019055
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400019055 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G27220.1 |
+1 |
1e-70 |
254 |
254/867 (29%) |
NB-ARC domain-containing disease resistance protein | chr4:13633953-13636712 REVERSE LENGTH=919 |
Transcript Sequence (3476 bp)
>PGSC0003DMT400019055 3476 pgsc_dm_v3.4
AAGTTAATTCTCCTCCACATCTTGCCAAACTTTGGCTCCAAGGAAAAAGAAATCAGCTAA
ATTGGCACATGGGGTTGGACCCTATGGCAAGTTGTGAAAAGATTCAGAGCAGGAAAAATG
TAATCTTCTACTATAAAACATGAGAAATACACCCTTTTATCCATACTCACTTCAAGAGTT
GAAAAAGAAGAGCATATTTTCTTTCTAGTTCTAGCCATCTATATGGATATTGCAGTTTCA
GTGGTGCAATGGTGTTGTGGTAAGCCTTTGGCTTGGGCATGGGATGAGGTGAAAAAACAG
TGTCTTTACTGTATAAAATATAAAGAAAATGCAGAGGCTTTTGAGAGTGAGGCTACAGAA
TTCCTAGAAAAAGTTCAACGCCTCGAAGAGGCCGTCCAAAGAAGTGGACGACACAGCATC
AGGGAAGAGCTTCATAGACAGCTTGATAAAGCCAGAGATGTCAAGAATAAGGTGAATGTT
CTAACAAGCGATATGGAGACAGCAACAAGTACTGGTTGCATCTCCAACTATAAGCTTAGT
AAAAGAATTGTTAAACTGAGAAAAGCTATGATGCAGCTGCTACAAGATCCGGAATTCATT
TCAGCAGTATCTCTGCAACCACAAGCAATTAGGCCGCGCTCTCGTGCTGAACGGCCTGAT
GATTTTCTTTATTTCCCCTCAAGAAAGCCAACCATGGATGAGATCATGAATGCCCTGAAA
GATGAGGGGCGTAGCACCGTACAAGTATATGGCATGGGAGGTGTGGGTAAAACCTACATG
GTAAAAGCATTGGCAAGTCGAGCTTTGAAGGAAAAAAAATTCGATCAGGTTGTGGTATCA
GTCGTCTCGCAAACTGTTGATTTGAGGAAAATTCAAGGGGACATTGCTCATGGCTTGGGG
GAGGAACTTACCTCCACTGAAGTGCAAGATCGTGCGGATGACCTTAGGAACATTTTGAAT
GACCACGGTAACATCCTGTTGATCTTGGATGACTTGTGGGACACAATAAACCTATCAACC
ATTGGGATACCACAATATTCCGAGAGCTGCAAATGCAAGATCTTAATCACTACAAGGCAG
ATGAATGTGTGTGACGATCTGGATAGGCAGTACTCCGCCATCCAAATCAAAGTCCTTTCA
GGCGATGATCCTTGGACATTGTTCACTCAAAAAGCAGGAGATAATCTGAAGGTGCCGCCT
GGTTTTGAAGAGATAGGGAAGAAAATTGTTGAGGAATGCAGGGGATTGCCAATAGCACTT
TCAACCATTGGAAGTGCACTGTACAAGAAGGACTTGACATATTGGGAAACGGCAGCTACA
CGTCTCCAGAGTTCTAAAACTGCATCCATTAAAGAAGATGATCTCAACTCTGTCATCAGA
AAATGCATAGAACTGAGCTACAGTTTCTTGCCAAATGATACGTGCAAGCGGGTTTTCCAG
ATGTGCTCCTTCTTTCCTGAAGATTATAATATCCCCAAGGAAACCTTGACAAGGTATGGC
ATGGGACTGGCCTTAATCCCAAACATCGAGAGAGTCAAAGAAGCAAGAGGTGATATTCAT
CAAACAGTCGAAGAACTCAAAGCTGCTTCTTTGCTCTTAGATGGCGATAAGGAGGAGACT
GTCAAAATGCACGATGTTATACGTGATATTTCAATACAAATAGGATACAACCAGGAGAAA
CCCAAGAGCATTGTTAAAGCAAGCATGAAATTGGAGAACTGGCCAGGGGAAATCTTAACC
AACTCATGTGGAGCAATCTCACTCATATCGAATCATCTTAAAAGGCTACCTGATAGAGTA
GACTGCCCTGAAACTGAGATTCTATTGCTTCAGGATAACAAGAACTTAAGGTTAGTTCCA
GATGAATTCTTCCAAGGTATGAGAGCTCTAAAAGTCTTGGATTTTACTGGTGTAAAATTC
AAGTCCTTACCCTCCTCAACTCAGCAGTTGTCGCTTCTTCGCTTACTCTCTTTGGATAAT
TGCAGATTCCTAAAAGATGTATCTATGATTGGAGAACTTAACAGGCTTGAAATTTTGACT
CTAAGAATGTCGGGGATCACATCATTGCCTGAAAGTTTTGCAAACTTGAAAGAGCTACGG
ATTCTAGATATTACCTTATCTCTTCAATGTGAAAATGTCCCACCAGGAGTAATATCTAGC
ATGGATAAGTTAGAAGAGTTATACATGCAAGGCTGCTTTGCAGATTGGGAAATTACAAAT
GAAAACAGGAAAGCTAACTTCCAAGAGATATTGACCTTGGGTAGCTTGACAATCTTGAAA
GTAGATATCAAGAATGTTTGTTGCCTACCTCCTGATAGTGTTGCTCCTAATTGGGAGAAA
TTTGATATATGTGTTAGTGATTCAGACCAACGCAGGTTCGCCAACGCAACACATGAGGCC
TCATTTACTAGAGGGTTGGCAACTGGCGTCACGTTGGAAGCATTTCCAGAATGGTTTAGG
CAGGCAGTAGCACACAAAGTAGAGAAGCTGAGCTACCAATTATGTGGTAATTTGAGCAAT
ATTCTGCAAGAATACCACCATGGAAATTTTGATGGAGTGAAATCTCTATATGTAGACCAG
TGCGTTGACATTGCCCAATTGATAAGGTTGGGAAATGAATTACCAAATCAACCAGTGTTC
CCTCAACTGGAGAAGCTGAACATTCACCACATGCAAAAAACGGAAGGCATCTGTGTCGAG
GAGTTACTACCTGGATCTTTACAAAAAGTCAGAACTCTGGAGGTCGGAGAGTGTCCTAAT
TTGAAAGATTCACTCCTTCCTCCTAATTTAATTCAAAGAATGCCAAATCTTGAAGAAGTT
AAGGTAACAGGAACCTCAATCAATGCTGTGTTTGGATTTGACGGCATCACATTCCAAGGT
GGACAATTAAGGAAGTTGAACAGATTGACACTGCAGAATCTTTCTCAACTAACTAGCCTA
TGGAAGGGTCCTAGTGAATTAGTTATGTTCCACAGGCTAGAAGTTGTTAAAGTTTCACAA
TGTGAAAACCTCAGGTATATCTTCCCTTACGCCGTTTCTGATTACCTTTGTCATTTACAA
GTACTATGGCTAGAAGATTGCAGTGGTTTGGAGAAAGTGATAGGTGGTCACACAGATGAA
GTACCAGAAAGCATAACTCTCCCAAGACTAACTACTTTGAGGCTTCAACGTCTACCACAT
CTCACAGATTTCTACACTCAAGAGGCATATTTACGTTGCCCTGAATTGCAAAGACTGCAT
AAACAGGATTGCAAAAGATTGAGAACTAACCTCTCTGATTACCATAGTGATCAGGAAATC
CAAGAAAAGAGCAGCTGAATCGTCTAGAGATTTTCATACTTTTATATAGTTTTGTAGACT
GATTTTTACTTTATTTTTGAGTATATATAGCCCCCTTAAATTAAATTTAGTGTGCTTTAC
TCATATTTTTCTCTTCCAACAGAGTTCAGGAATATGAAATCTATGTTGCAACTTGC
