Microarray Probes on PGSC0003DMT400018826
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_30846_PI426222305 |
JHI_St_60k_v1 |
AGAGAGACAGCTGATTACATTTTGGCTTTAGAAATGAGAGTTAAGGTTATGCAAGATATG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400018826
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400018826 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G47270.1 |
+3 |
4e-14 |
66 |
32/53 (60%) |
sequence-specific DNA binding transcription factors;transcription regulators | chr2:19411741-19412049 REVERSE LENGTH=102 |
Transcript Sequence (459 bp)
>PGSC0003DMT400018826 459 pgsc_dm_v3.4
AAAAAATTGTCAAAAGAGCTATCTTAAAAAGATTCAACATATATACATAATTTCTTATGG
GTATTTTTTCTCATACTCCTAACAAGGGAAAGTGTGATTTAAGCGATTCTTTTTTAAGAG
GTCAACGCCACATAAGGAGACAAAGAGTCACGACTTATAACGTAAGGCATGTCAAAAGGT
GTAAAAGTGTTGTGATGAAGAGAAGGGTACGCGTAGAACGTTCTAGAAGGTTCGAGGATG
AGATTGGAAGGAAAGTCAGGGTACTTAAGAAGTTGATTCCAATTAACTGTGAGGATTTGG
GGTTGGAAGGGATTTTCAGAGAGACAGCTGATTACATTTTGGCTTTAGAAATGAGAGTTA
AGGTTATGCAAGATATGGTAAATGTATTGTCACCTTCTAATAGTGACTAGAAGATCAATA
AATCATGTATTATATTGTGTCAAAAATGACTTATATACA
