Microarray Probes on PGSC0003DMT400018642
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_30515_PI426222305 |
JHI_St_60k_v1 |
TTCCCCAAATTATAAGTACAGCAGCCCATGATTATGAGCTAACACTTGTTTGGATGTTTG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400018642
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400018642 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G14770.1 |
+2 |
3e-73 |
232 |
140/225 (62%) |
Nodulin MtN3 family protein | chr3:4957787-4959202 REVERSE LENGTH=236 |
Transcript Sequence (1224 bp)
>PGSC0003DMT400018642 1224 pgsc_dm_v3.4
ATTTGTCCTTGCATCCATAATCATTTACACCTCTAATGCTGTAACTTCTAGCACACAACC
TATTTCCTCTCAGCTTCAATAAGAACTGAGATTTTCCTCTGTTATATGTTTTAAAAAAAA
TTGAGGTTATTTGAACAAAGAAAGAATGTTAGTTGTAGGTGGATTATACTCAATTTGCAG
CTTTGCAGCTGGGATTGCAGGGAATCTCTTTGCATTCGTCTTATTTGTGTCACCAATACC
AACATTCAGAAGAATCATTAGAAGCAAGTCTACAGAACAGTTTTCTGGATTACCATATAT
ATATGCGCTCTTGAATTGCTTAATATGCCTCTGGTATGGGACACCAATTGTATCTCCTGG
TATTATATTGGTTTTTACTGTCAATTCAATTGGAGCAGTGTTCCAGCTAGTATATATTAC
CATCTTCATTATTCATGCAGAGGGGTCCAAGAAGTTGAAAATGCTGGGGTTGGTGCTTGG
CGTTTTTGCTGTATTTGCTGCTATAGTTGTCATCAGCCTATATCTATTTGAGCCTGCCAG
TCGGCAAACTTTCGTTGGATATTTATCAGTCTTTTCTCTCATTTGCATGTTTGCTTCTCC
ACTATTCATTATTAATTTAGTGATCAAAACAAGGAGCGTGGAGTACATGCCATTTTATCT
ATCCCTTGCGACTTTTCTCATGAGCCTTTCTTTCTTTGCCTACGGAATGTTCAAGAATGA
TCCATTCATCTCTGTACCAAATGGGATCGGAGGAGTTCTTGGTGTCATACAACTGGTACT
CTACTTTAGATATAGCAATTCAGGAGAGGAGCCAAGAGCACCTCTCTTGGACTCTTATGC
ATGAAACACAAGACTATAGCTGGAACAATCATTAAGAAATGGCAAAAAACTTTTATCTCT
TTTCTTCTTTTCACTGATTCTTTTTTCTTGTGTTGAGAATTTGAGAAGGTCAGAATTTTC
TTTTGTTTTTTCTTTTTTCCAGGGAAGAATTTGGTATATGTGTTAAAAGTGGTGAAGGGT
AGTATATAGTATATCATTTATGGGAAATTAAAGTTATTTATCATTTGTTGTGTGCTCAAA
TTAATATTGAGCATCTATTGTTTCAGTTGCTGAGATATAACTCTCAGCAAGTTTATGTAT
TCATTGGATTGATGTATACAGATTTTCCCCAAATTATAAGTACAGCAGCCCATGATTATG
AGCTAACACTTGTTTGGATGTTTG
