Microarray Probes on PGSC0003DMT400018553
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_46127_PI426222305 |
JHI_St_60k_v1 |
TTTCTGTAATTTCACTTGGAGGGTGTAGATTTTTGGAGAAGTAGAGGAGAGGGTAAAATG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400018553
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400018553 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G56880.1 |
+2 |
7e-30 |
115 |
86/243 (35%) |
VQ motif-containing protein | chr3:21060044-21060781 FORWARD LENGTH=245 |
Transcript Sequence (936 bp)
>PGSC0003DMT400018553 936 pgsc_dm_v3.4
GGAGGATGCAGTTCAACACATTTTGTTTCTCTAAAAATTGAATCTTTTTAGCTCTATTTT
TGTACTAAAAATGGCTTCTTCTGACAATTTAATGACCATGGAGCCATGGGCTTTCCGTTC
TGCTTTTGCTGATTCTTGGTTTTCCGACGTATTCACCAGAGAAACTGAAACATTAACCAA
AGTCCTCCAAAAATGTGCCTTTCCTGAGCCAGAGACTAAACCGGTTCAGACTTCAACCGG
GTCCGGTCGAACCAATTCCGGTGGGTCAGAGAATGAGACGACCGGTTTTTCGAACCGGAG
GAGCAAAGTCGGAGTGAACGGGAAGATAACTAAGAGGAAGTCACGTGCTTTAAGGCGTAA
TACGACCACGTATATAACTGCTGACGTGGATAATTTCCGGGAAATGGTGCAGCAGGTGAC
CGGCGTTAGCTTCGGCGGCGACGGACAGCTGCCGGTTGCTCATGTTCTGAAACCTGAACC
TCAGCGTGTTGTTAACCGGCTACAGCCTGGTTGCTTTTTGCCAACTCTTGACACGTCAGC
TTTTTTGTTGGACCACGTCACTCAACAATCAATGGAACCTATGCTGGCACAGCCGCAGAC
GGCGGCGGATGTGGTCGTTGATGGCGCCTCATGTGGATTTGATTTTAGCTCTTTTTCTGC
CTTTCCTACCCTTGAGTCATTCATGGAAAACAGCAATGTAGTTTAATGTAGCAGACCCTT
TCTGTAATTTCACTTGGAGGGTGTAGATTTTTGGAGAAGTAGAGGAGAGGGTAAAATGGG
AAAAATCAAAATATGTTCATAGTTTTAGTTTTAATTTTAGCTAATCTAGTAGTGTTATTT
TTCCTTTTTTTTTAGTAAATGAGAATATGAAGGGATATGAGTTGTCATATCCTTTCATTT
TCATGTTTCAATTGTAATCTCAAATCTAATTCAAAT
