Microarray Probes on PGSC0003DMT400018218
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_17994_PI426222305 |
JHI_St_60k_v1 |
GTACAATAAGTGGGTCCACAGCTAGTAGTCCAATAAATGAGTACTTCCTATTTAATGTTA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400018218
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400018218 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G78860.1 |
+1 |
5e-85 |
269 |
145/300 (48%) |
D-mannose binding lectin protein with Apple-like carbohydrate-binding domain | chr1:29646168-29647499 REVERSE LENGTH=443 |
Transcript Sequence (1184 bp)
>PGSC0003DMT400018218 1184 pgsc_dm_v3.4
CCAATCTCAAGAAGCAAATGTATCATCTAACAAACAAGCTAAAACAACAAACTAAACATG
TCTTCTTCCTGGCCTACTACACTTCTTGCCTCTCTCTTTCTTTTCTCCCAAATATTTTCT
TGCATTGCTCAAGTTCCAGCAGAAAACACCTTTAAATTCGTCAATGATGGCGAATTAGGA
GATTATGTTGTAGAATACAGAGCAAATTATCGCGTTATTAGTATTTTCAATAACCCATTT
CAGCTCTGTTTCTACAACACAACTCCTAATGCATGGACATTAGCATTGCGAATGGGCACT
GTCCGTTCTGAATCACTCATGCGTTGGGTGTGGGAAGCAAATAGGGGAAACCCCGTTAAA
GAAAATGCGACATTCACGTTTGGAACTAACGGAAATCTCGTATTGGCGGATGCTGACGGT
CGAATCGCTTGGCAGACCAACACGGCCAATAAGGGGGTCACCGGGTTCAAATTGTTACCT
AACGGTAACATGGTGCTACATGACTCCAAGGGTAAATTCGTCTGGCAGAGTTTCAACTAT
CCCACTGACACATTACTAGTGGGCCAAACTCTCCGATTGTCCGGCCCGAATAAGCTTGTG
AGCCGGGCCTCGGTGAAAAAGAATGCAAACGGGCCTTATAGCTTGGTGGTGCAGCCGAGA
TTGTTCGCTGTCTACAAGGGAAACAAGGTAGACGTGGAATTAGCTTGGTTCGATTATGGG
AATAACACGTTGGAATCGATAAAATTGAATAGTGGGAATCAAAGATTGAAATTGGATTAT
AGATTTGCAAAATCAACACAGAGAAGTTCACATGTGATGGCATTTACTAAATACAACACA
ACATTGACATATCTTAGACTTGAAATTGATGGAAATCTAAAGGCCTACACTTTTGTTAGA
GATGAAGAAGCAGATGAATTCCGTTGGAAAGTAACTTACAGTAGGATTTGAAACGTCTAA
ATCTGTATACACATTATCCTTTACGAGCAAATTTCACGGGTTATATTATTATTGTTGTTG
TTATATTGTTGTAAACGTAGCTCTATAAGATAATGATTAGTGTGTCCAGTACAATAAGTG
GGTCCACAGCTAGTAGTCCAATAAATGAGTACTTCCTATTTAATGTTAATTATATTTTTC
TTTTTCCCTTTTTGAAAAAATATTATGTTTTGGTTGAATTAAGA
