Microarray Probes on PGSC0003DMT400017966
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_33242_PI426222305 |
JHI_St_60k_v1 |
GCAAATCCTTTTCTGTCAGAGATTGGTCCAGTGACATTGATAACAATGACGACAATGACA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400017966
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400017966 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G01930.2 |
+3 |
1e-160 |
344 |
233/316 (74%) |
Major facilitator superfamily protein | chr3:319289-321488 REVERSE LENGTH=584 |
Transcript Sequence (2184 bp)
>PGSC0003DMT400017966 2184 pgsc_dm_v3.4
ATGAAATTTCAATCATAATCTAGTGTTACTTGTGCCTTATCTTATCACCAATAAGCCCTG
CTTGATTGGAGTTGAGGCATAGTACCAAAGTTTGCACTTGGATATCGATATAAACATAAT
CAATACTCATTCTGCTTCTCTCAGATAGTTGGTCATTGCCTCAGTCCCTATATTGCTGAC
CATCATAATGAATTATGTCTTATCCATAACATAAATTGGGCATAACTTATTAGTGTCAAC
TAGAGTGCAAAATTGTCACACATTCCTTGTTTTCTCTAACAGTTGACTTAAGTTTAACCA
TTTCTCTGCAGATGTGCATTCTTATATTTGTAGGAACAAATGGTGAAACCTACTTCAACA
CAGCAGCTTTAGTCTCTTGTGTGCAAAATTTCCCGAAAAGTCGTGGTCCTGTGGTTGGAA
TTCTTAAGGGATTTGCTGGCTTAGGTGGTGCTATTTTAACTCAGATATATGCAGTAATCC
ATTCCCCGGATCACGCTTCACTTATATTTATGATTGCCGTTGCACCAGCAATGGTGATTA
TAGCTCTCATGTTTATAATCAGGCCTGTTGGAGGCCATAGACAAGTTAGGCCTTCTGATG
GTTTAAGTTTTTCATTTGTTTACAGTATATGCCTCCTTTTAGCTTCTTACTTAATGGGAG
TTATGATTGTTGAAGACGTTGTTGATGTTAGCCAAAATGTTATTGTAATCTTCACAGCTA
TTCTATTTGTTATCTTGATAATCCCTATTGTGATCCCTATCTATTTGAGTTTCACTCAAG
AGCCAAGAGTAGTACCAGAAGAAGAGGCACTTCTATCTCAGTCAGGCGATCAAGGTCCTG
GCAGATCAGAACACGACGATGGTCAAGAAATTATATTTAGTGAGGTTGAAGAAGAGAAAC
CGAAGGGAGTAGACTTGCTTCCTGCTTTAGAAAGGCAGAAAAGAATCGCGCAGTTACAAG
TGAGACTAGCACAAGCAGCTGCAGAAGGAGCTGTGAGGATCAAAAGAAGACGAGGTCCTC
GTAGGGGAGAGGACTTTACTTTAGTCCAGGCTTTAATAAAAGCAGATTTCTGGCTTATGT
TTTTCTCATTGCTTTTTGGTTCTGGATCTGGTTTGACTGTCATTGATAACTTGGGACAAA
TGAGCCAATCTTTAGGATATGAAAACACACATGTATTTGTTTCGATGATTAGCATATGGA
ACTTCCTTGGCCGTATTGGAGGTGGATACTTTTCTGAGATAATCGTCAGGTATTAACTTA
TCTTTACATGAATATTCATATCTCATAAATCTCTCACACGACCTTGTCAAACAGGGATAA
TGCATATCCAAGGCATGCAGCTATGGCTATTGCTCAAGTTGTGATGGCCTTTGGTCATTT
CTTCTTTGCTATGGGTTGGCCTGGAGCTATGTATATTGGTACTCTTTTGGTTGGACTTGG
TTATGGAGCTCATTGGGCGATTGTGCCAGCTGCTGCTTCTGAATTGTTTGGGTTAAAGAA
TTTTGGGGCTTTGTACAATTTCCTCACTATTGCCAACCCAGCTGGTTCATTAGTATTCTC
AGGTCTTATTGCTAGTAGTATATATGACAGGGAAGCTGAAAAGCAAGCTCAACAGCCCCA
TGAAGGACATTTGAATTTGGCGTCAGTTTTGACAAGTTTTTTAAACATGGATGAACCTCT
AAAGTGTGAAGGTACCATTTGCTTCTTCTTGACTTCCTTGATAATGTCAGGACTCTGCAT
TGTTGCAGCTGTTCTAAGCATGATTCTGGTGTACCGCACAAAGACAGTGTACGCTAATCT
GTATGGAAGATCTCGTACGTAATGTATCCTCGAAGGATAGAAATATAAGCATCCTGAAAA
AAGACATTGTCTGCCAATTCATATTTCCACATATCATTATAATGTGACACTGGAAACCAT
CACCAGAATACTTCCAGGTGAGAGCAAACGACGAAGAAGACAATAGCCTGGTTTTGCTGT
TGCAAAAGCATTCCTTGGTTGAGTGAAATAATATTTGTATTGCAAGTCATTTCTGTATAT
TTGTAATTTCTCAATCTTCAAGTTGTTAAATTTTTTATTGTCAACCACCATTAGTAAGAG
CGTTGATTGATTTTTTGCTAATTGGCAAATCCTTTTCTGTCAGAGATTGGTCCAGTGACA
TTGATAACAATGACGACAATGACA
