Microarray Probes on PGSC0003DMT400016814
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_49375_PI426222305 |
JHI_St_60k_v1 |
GCTAGCCAAGTCGGATATCGTCTAGTGTTTTGTTCAACTTTTATTTTTCACTTTTGTGAT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400016814
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400016814 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G05510.1 |
+2 |
4e-125 |
362 |
165/240 (69%) |
Protein of unknown function (DUF1264) | chr1:1629527-1630690 FORWARD LENGTH=241 |
Transcript Sequence (970 bp)
>PGSC0003DMT400016814 970 pgsc_dm_v3.4
CACCACAACAAAATACTTTACTATAATTTTGAATTTATTTGAGATTTTAGAAAAAAAAAT
GGAAGGAATAAATGTATCGACTCATCCAGATGTTCCAGGTGAACCTACGCAAACAGGAAC
AGCAATTCTTGAGACTGCAACAGCTACCATTCAAGGATTTGGTCCTATCAATAAAATTCA
TCAACATCTTTGCGCCTTCCATTTCTATGGACATGACATGACACGACAAGTCGAGGCCCA
CCACTTTTGTGGGCACCAAAACGAGGAATTCAGGCAATGCCTCATTTACGACAGGCCTGA
TGCCGATGGTCGTCTAATTGGGCTCGAGTACATTGTATCGGAGGAGTTGTTCTTGACATT
GCCAGACGACGAAAAGAAATTTTGGCATTCCCATTTGTACGAGGTGAAAAGCGGTGTCCT
CTTCATGCCCGGTGTTCCAGGCCCGATTCAACGACAAGATCATGAAAAAACCGTGAAAAC
TTATGGCAAAGTGATACATTTCTGGCAGGTTGATAGAGGTGATACACTTCCTTTGGGAAT
TCCTCAAGTTATGATGGCGCTTACTAGAGATGGTCAACTAGATCAGAACCTTGCTCAAGA
TGTGGAGAAACGTTTTGGTGTGTCATTTGATGAAGAAAGGGAGAAGAGGGCATACATGGA
AGGTCCTGCCCATGGGATTCACCCACTTGCTAATGCTGGAGGCAAAGGCATTCGCACTCT
CCTTAGAGAAGTTGATTGTAAACCTATCGAATCTGTCCCTAGAGTTTTTGTTTAATCTCC
GACCGCGAAGTCGCGTTCGATTGCTCATATGTTCATCTCGTTTTGGCTAGCAAAGTCATG
TTCGATTGCTCAAATATTTATTTCGTTTTGGCTAGCCAAGTCGGATATCGTCTAGTGTTT
TGTTCAACTTTTATTTTTCACTTTTGTGATATATAGGACTTGTATATATATATATATATA
TGTTGGCGTG
