Microarray Probes on PGSC0003DMT400016707
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_39234_PI426222305 |
JHI_St_60k_v1 |
CAGATTGTTTTGTGAACGTGATGAATTATACACATCTCCATTCCCATCCCTTGAATTTCT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400016707
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400016707 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G46730.1 |
+1 |
2e-138 |
436 |
313/863 (36%) |
NB-ARC domain-containing disease resistance protein | chr3:17213069-17215612 REVERSE LENGTH=847 |
Transcript Sequence (2553 bp)
>PGSC0003DMT400016707 2553 pgsc_dm_v3.4
ATGGCTGAGGCCTTTGTATCATTTGCAGTTCAAAAATTGGGTGATCTACTCATACAACAA
GTTTCCCTGCGTAAAAATCTAAGAGAAGAAGTTACATGGCTGCGAAACGAGCTTCTCTTA
ATGCAGTCTTTCCTCAAAGATGCAGAACAAAAGCGAAGTGGAGATGAAAGAGTTGAACAA
TGGGTGCTTGAGATCAACTCTATTGCTTATGACGTTGTTGCTATACTCAAGACTTATAGC
ATCGAGGATGGTAAATGTGCTAGTTGTCTCAAGGTTTGCGCTTGCATCTGTAGGAAGAAA
TCCTACAATGTCGCCAAAGAGATCCAATCACTCAAGCAACGAGTCATGGATATCTCTGTC
AAGCGAGAGACTTATGATATTACAAATACTATCAATTATAATGCAGGAAAAGGGACAAGT
AATAAGGTTAGAACATTGAGGAGAACTACCTCATATGTGGATGACCAGGATTACATTTTT
GTTGGACTTCAAGATGTTGTACAAACATTGGTATATGAACTTCTCAAAGCAGAGCCTCGT
CGAAGCGTCCTCTCCATTTATGGAATGGGCGGTTTAGGCAAGACCACTCTTGCCAGAAAA
CTTTACATCAATCCTAATATAGCCTCTAGCTTCCCAACATGCGCTTGGATATGTGTTTCT
CAAGAGTACAACACAATGGATCTTCTTTCGACTATCATAAAATCCATCCAAGGTCGCACC
AAGGTAACTCTAGATTTGTTGGAAAGCATGCCAGAAGGAGATCTAGAAATTTATCTTCGT
GATCTATTAACAGAACGCAAATACCTTGTGGTGGTTGATGATGTACGGCAGAAAGAAGTA
TGGGAGAGATTGAAAAGAGCATTCCCGGATAGCAAGAATGGCAGCAGAGTCATTATTACC
ACGCCCAAAAAGGATGTCGCTGAAAGAGCGGATAACAGAGGTTTTGTCCATGAACTTCGT
TTCCTAACCCAAGAAGAAAGTTGGGATCTCTTTCGTAGGAAACTACTTGATGTTCAAGCA
ATGACCTTCACTATGGAGAGGGTAGCTAAGAATATGGTGGGAAAGTGTAGAGGCTTACCT
CTTGCAATTGTTGTATTGAGCGGACTACTTTCACATAAAAAGAGGCTAGATGAATGGCAA
AAGGTGAAAGATCACCTTTGGAAGAACAATGTTGAAGATGAATATATTGAAATCTCCAAC
ATACTATCATTAAGCTACAATGATTTGTCAACTGCGCTCAAGCAGTGTTTTCTCTACTTT
GGTATTTTTCCAGAAGATCAAGTGGTCAAGGCTGAAAACATAATACGGTTGTGGATGGCG
GAGGGTTTCATACCAAGAGGAGAAGAAAGAATGGAGGATGTCGCTGAAGGCTACTTGAAT
GAGCTGATAAGACGAAGCTTGATACTAGTTGTACATACATTTTGGGAAAGAGTTACTGCA
TGTAGGGTTCATGATTTACTCCATGATCTTGCGATACAAGAGGCATTGAAAGTAAACTTC
TTTGGCATTTATGATCCAAAAAGACACTCCATATCCTCTTTATGTATCAGACATGTCATT
CATAGTCAAGGAGAAAGGTACCCCTCACTTGATCTTTCTAACTTAAAGTTGAGGTCAATT
ATGTTCTTCGATCGTAAGATTAGTCTTATAAATTTCAGTAGTGTGTTCCAACATCTCTAT
GTGTTATACTTGGAGATGTGTGTTGACAAGAATCCACATCCACATTTAGTTCCTGATGCC
ATAGGAAGTTTGTACCACCTCAAGTTCTTAAGATTGAGAGGTCGTATCCATGATCTTCCC
ACTTCCATTGGCAACCTCAAGAATCTACAGACACTTGTTGTCAATGGATACTCTTGCAAA
CTACCCCAAGAGACAGCTGACCTAATAAATCTAAGACATTTAGATGCTCGGTATTCAGAA
TCTCTGAAACATCTAAGCAAACTCACTAGCCTTCAAGTTCTTAAAGGCGTTTATTGTGAT
CAGTGGAAAGATGTTGACCCTGTTGATTTAGTCAACCTTCGAGAATTAACCATGTGTAGT
ATTTGGAACTCTTACTCCCTAAAGAACATTAGCAGCTTGAAAAACCTTAGCACTCTCAGA
TTGTTTTGTGAACGTGATGAATTATACACATCTCCATTCCCATCCCTTGAATTTCTTTAT
TCTTGTGAAAAGCTGCAGAAATTGTGGTTAAAAGGGAGAGTAGAGAAACTGCCTCTGTTT
CCAAATTCCATCACAATGATGGTTCTTTGGCAGTCAAGACTCATGGAGGATCCGATGCCT
ATTTTGGGAAAGTTGCCAAACCTAAAAGATCTCATATTACAAGAAGCTTATAAAGGAAAA
GAAATAATGTGCAGCGATAACACCTTCAGTCAACTAGAGTCCCTTCGTCTTTATGATCTT
TCAAACCTAGAACGATGGCATTTAGACACAAGTGCCATGTCTCTCATTAAAGGTCTTCAT
ATCCATGCTTGTCCAGAGCTGAAGGAGATTCCAAAGAGAATGAAAGATGTTGAAGAGAAA
TTAAATATGGTGGAGCTTTACAAGCATATGTGA
