Microarray Probes on PGSC0003DMT400016646
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_45405_PI426222305 |
JHI_St_60k_v1 |
GGCACAGAATATGCAACCTGTATCAGTTGATTAATGGTCTATTATTATAGTGATAGCTGT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400016646
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400016646 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G61440.1 |
+1 |
2e-174 |
496 |
274/343 (80%) |
cysteine synthase C1 | chr3:22735885-22737792 FORWARD LENGTH=368 |
Transcript Sequence (1268 bp)
>PGSC0003DMT400016646 1268 pgsc_dm_v3.4
TCCATTTATAAAAGGCATGTCTTATCTTTGAAATTTGAAGACAAATTGTAGTGAGTAGGC
ATTTACAACTTCTAACAAATTTCATCAATGGCGTCCTTACTAAGGAGAAGATTTTATTCG
AGTGAATCATCATTTGCTCAGAGGCTAAGAGATCTGCCAAAGTACCTTCCTGGTACCAAC
ATCAAAACTCAAGTTTCTCAACTCATTGGGAAAACACCATTGGTGTATCTTAACAAAGTG
AGTGAAGGATGTGGTGCTTATATTGCTGTTAAACAAGAAATGATGCAACCTACTTCTAGT
ATCAAAGATAGACCAGCATTTGCTATGATCAATGATGCAGAAAAGAAAGGATTAATCACC
CCTGGGAAAACAACACTAATCGAGCCAACGTCAGGGAATATGGGAATAAGTATGGCATTT
ATGGCTGCCATGAAAGGCTACAAAATGATTTTGACAATGCCATCCTATACAAGCTTGGAG
AGGAGGGTGACCATGAGAGCATTCGGAGCTGATTTAGTGATCACTGATCCAACTAAAGGA
ATGGGAGGAACTATTAAGAAAGCTTATAATCTTTTGGAATCTACACCTAATGCTTATATG
CTTCAACAATTCTCCAATCCAGCTAATACTCAAGCTCATTTTGAGACTACTGGCCCTGAA
ATTTGGGAAGATACTCAAGGTAATGTTGACATCTTTGTCATGGGAATAGGAAGCGGAGGC
ACAGTCTCTGGTGTTGGACAGTATCTGAAATCGAAAAATCCTAATGTCAAGATATATGGA
ATTGAGCCAACTGAAAGCAATGTATTGAATGGTGGAAAACCAGGTCCTCACGAAATAACT
GGCAATGGGGTTGGATTCAAGCCGGATATCCTTGACATGGATGTAATGGAAGAAGTTCTG
ATGGTTTCGAGCGAAGAATCGGTAAACATGGCTAGGGAGTTGGCATTGAAGGAAGGCCTT
ATGGTTGGTATATCATCAGGAGCAAATACAGTAGCCGCACTTAGACTCGCCAACAGACCA
GAAAACAAAGGAAAACTCATAGTGACAATACATCCAAGTTTTGGAGAGAGGTACTTGTCA
TCTGTTCTGTATGAAGATATCAGGAAAGAGGCACAGAATATGCAACCTGTATCAGTTGAT
TAATGGTCTATTATTATAGTGATAGCTGTAGTGAAACTAGTACAAGAAAAAATAATATAT
GTACTACATTTTCTGAAATAATGTTTATGCTTTAAATAATAATGAAAATTTATCCTTTTT
GAAATCCG
