Microarray Probes on PGSC0003DMT400016500
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_44036_PI426222305 |
JHI_St_60k_v1 |
CAAAGGATGGATCAGCAGAGCAATCTTCAGTTTCATGTCAAGTAATTTTGACAAATTTGT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400016500
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400016500 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G14750.1 |
+1 |
2e-65 |
218 |
157/325 (48%) |
IQ-domain 19 | chr4:8470449-8471903 FORWARD LENGTH=387 |
Transcript Sequence (1360 bp)
>PGSC0003DMT400016500 1360 pgsc_dm_v3.4
TGCTGATGCAGCTGCGGCTGCTGCCAAGGCTGCAGCAGCAGCGATCCAACTCACTTCTGC
TGCTAGAGCCTATGCACTTGAAGAGGATGCAGCAGCCAAGATTCAAGCAGTTTTCCGTGG
TTATTTGGTAATATGAAAATTTCAGGTTGATTTCTCAGATGATCACACAACTAACCATCA
TTATCTCAGAACGTCAAAAGTGACTTTCGTGATCATCTGAAAAATCAACTCGACTAGTTT
TATAATTAATCATCACAATTCATTCTGATCTATGTTCCAAGATTACATTTTTATATAACT
GTTGCATTGACAACCTCTCTGCAGGCAAGAAAAGCCTTGAATGCACTAAAAGGACTAGTG
AAGTTGCAGGCCTTAGTAAGAGGACATTTAGTGAGAAAACAGGCTGCTGCAACTCTCAGA
TGTATGCAAGCATTAGTGACTGTTCAAGCTCGAGCTCGAGCCCAACGAATACGAATGGCT
GAAGATGAAAGTCCCAACAATCCAAGACAATCTGTTCACAGAAAATCTACTCAGGACAAC
AAATTTAGGCACTCATATCAAGATTATGAAGAGGACATCAAGATTGTGGAAATGGATTTA
GGAGAATCAAAAGGCAACACAAAGAGTAGAAATTGCTATTCAAACCAAGGCGAAACAGAG
AGAACAGAACATCGATTTTCAACACACAATGCGTACACAAATCAAGAACATCATCAACAG
ATAATCTCTCCAGTACCATCAGCTATAACAGATCAAAGTCCAAAAGCCTACAGTGGACAC
TTTGAGGACTACACATCATATCCCACAACACAAAGCAGTCCACAATACTATAACAACACA
ATGTCAAAACCTGATCCATCAAGAATCCCATACTCATCATATGCTCGTTCAGAGTATGCA
GAACCTGAATCACTTTACAATGAGTATCCATTTTATCCAAGTTACATGGCGAATACTAAG
TCATCGATGGCTAAAGCACGATCTCACAGTGCACCAAAGCAACGTCCTGATCAAACATCA
TTTGAGAGACAACCAAGTAGACGAAGACCATCAATAGAAGGACGAAACGTCCCAAGAGCT
GTGAAAATGCAGAGATCATCTTCACATGTTGGATCAACAGCTCAAAATTATCAGTATCCT
TGGTCAATCAAGCTTGATAAATCAAATATCTCAATCAAAGATAGTGAATGTGGATCAAAT
TGTAGTGTCTTTACTACTCACACTAATTACTGCAGATCACTTTTTGGTTTCGATGTTCAA
GAACATAGGTACTAAAACAAAGGATGGATCAGCAGAGCAATCTTCAGTTTCATGTCAAGT
AATTTTGACAAATTTGTATTTCTAGTATTAAAGTTCTTTG
