Microarray Probes on PGSC0003DMT400016361
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_46456_PI426222305 |
JHI_St_60k_v1 |
CAAGTCTCTGTTCTCTACTTCATTGACTGATCTACTGAATTTAGATCATGTAGCTTGTTA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400016361
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400016361 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G12770.1 |
+3 |
1e-146 |
453 |
229/671 (34%) |
mitochondrial editing factor 22 | chr3:4057027-4059193 REVERSE LENGTH=694 |
Transcript Sequence (2614 bp)
>PGSC0003DMT400016361 2614 pgsc_dm_v3.4
CACGAAATTCAATCTCTACCGGTCTCCCCTGTTCGGATTTTCAGTTCAATTTCATCCAAA
GAGTAAAGATAACATTTTCTTTTTCAATTTCAGATAAAATAAAACTGAAGAACAATGAAG
TAATCTTTTCCCAGTTTTATACAGTCAGTGGCGAATTCATGGCTTCTCTGCCTTCAGTAG
TTGTGGGCAACACCCTTAAGCTTGAAAATGAATTCAAGAAAAACTCAGTAACTTCTTTAC
CTTTCGAAAAGAAAAATCATAGTCCCATAAACTCGGATAAAGCTTTGGAGCCATTGAATC
TTGAATTCAGAGAGGCACTTTCACTGATCAAAGAAGGTAGTGAAAAAGTGGAATCAGCTT
CTTATGTTCCATTTCTGCAAGAATGTATCAAGAAAAAATCCGTTTCAGAAGCTGAAGCAA
TTCATGGCCACATTATCAAAATGGGTATCCATGAAGATTTGTTTCTCATGACATTTCTTG
TTAATGTTTATGCGAAATGTGGAATGATGGGAAGTGCACGGAAGGTATTCGATAATTTGC
CTAAAAGAAATGTTGTTACCTGGACATCATTGATGTCTGGCTATGTTCAGAATTCGCAGC
CGGAGGTTGCTATTAGCGTATTCCAAGAAATGCTGGACGCGGGTGGATTTCCCACGAATT
ATACGTTAGGTGTTGCGTTCAATGCTTGTTCATTGTTGGGTCATTTCGAGTTAGGAAAGC
AGATTCATGCGTATGTTGTGAAGTATGAACTTGGGGATGACACAAGTATTGGCAATGCTC
TCTGTAGCTTGTATTCCAAAAGTCACAATCTGGATTCTGCAGTTAAAGCATTTCGGATGA
TTGCTGATAAGAATGTTATCTCGTGGACAGCAGCTATATCTGCCTGTGGAGATAACGGGG
ATTCTGCAATGGGATTAAGCTTGTTTGTTGATATGCTTTGTGCGGATGTGGAGCCTAATG
AGTTTACATTTACAAGTGTACTAAGTTTGTGTTGCATAATGCAGGCTTTAAAGATAGGAT
CACAAATTCATTCTTTGAGCATTAAACTGGGGTATGGTTCTAATCTAAGAGTCACAAATT
CAATAATGTACTTATACTTGAAAAACGGATGGATTATAGAGGCAAAGAAGCTGTTTGATG
GAATGGAGTCAATTAGCTTGGTTACATGGAACGCGATGATTGCAGGTCTCGCTCAGATGA
TGGATCTTGGAGAGGACGGTATTGCTGCACATTCCAGCGGTTTTGAGGCACTAAACACTT
TTTTGAGACTGCATCATTCGGGGATGAAACCTGATTTATTCACCTTCTCGAGTGTGTTGT
CTATATGTAGTAGTTTGGTTGCTTTGGAACAAGGGGAGCAAATTCATGCTCAGGTTATTA
AGTCGGGGTTTTTGTCGGACGTTGTAGTGGGAACTTCCCTAGTTAGCATGTATAATAAAT
GTGGAAGCATTGACAGGGCAAGTAAAGCTTTTGTGGAGATGTCTACACGAACTTTGATAT
CTTGGACGTCTATGATCACGGCCTTTGCACAACATGGGTACTCTAAACAAGCGTTGCAGC
TCTTTGAGGATATGAGGTTTGTAGGAGTTAGACCAAACAAGGTTACATTCGTGGGAGTGC
TCTCGGCATGTAGTCATGCTGGACTGGTCAAAGAGGCATTGACATACTTTGACATGATGA
AAAAAGAGTACAAAATTAAGCCCGTGATGGACCATTATGCATGCTTGATTGATATGTTTG
TGAGGTTAGGTAGGATAGATGAAGCTTTTGATTTCGTCAAGAAGATGGATTTTGAGCCTA
ACGAGTTTATATGGTCACTTCTAATAGCAGGCTGTAGAAGCCATGGGAAATTAGAGCTAG
GTTTTTATGCTGCTGAACAACTACTTAGCCTGAATCCGAAAAATTCAGAAGCTTACTTCT
TGTTGTTAAACATGTACCTCTCAGCTGAGAGATGGAAGGATGTTTCCAGGGTGAGAAAGC
TAATGAAAGACGAAAAAATTGGAAAGCTAAAGGATTGGAGCTGGATCAGCATCAGGGACA
AAGTTCATTCGTTTAGAACAGGTGATCAGTTGAATCCTCCATACGAAAATATAGATAATT
TCTTAAGTGATTTACATGACAAAGCAAGTACAATGGGATTTGAGTTACACACAAGTTTGG
AGCTCAAAAACGAAGAAGATGATGAGGCAACTTTTCCTATTGGTCGTCACAGTGAAAAGT
TGGCTGTATCATTTGGATTGCTGAACACACTGAGTGCTGCACCCATCCGAGTTATTAAGA
GTATTAGCATGTGTAGAGATTGCCACAGCTTTATGAAATTCATCTCACAGCTAACTTCAA
GAAAAATCATCATTAGAGATAGTAAAAGGCTGCACAAATTTGTGGATGGACATTGTTCTT
GCGGCGATTTTGGTAGTCTTGTTTAATTCTTTCTCAAAGCCTTCACTTACCTTAATTTCT
TCATAATTCATTTTTCTTATCAAGTCTCTGTTCTCTACTTCATTGACTGATCTACTGAAT
TTAGATCATGTAGCTTGTTATATGAAAGGAAAATCAGAAAAGTAAATAGTGGCTTATATT
GAGTTCTCTGTACTTTTGAAATTTCCAATTGTTG
