Microarray Probes on PGSC0003DMT400016040
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_42288_PI426222305 |
JHI_St_60k_v1 |
CGTTGTGCCAAGGTTTCTATAGTCTGGTTTCTCAAGTCTATTGCAATTTTTCATGTATAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400016040
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400016040 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G08970.1 |
+2 |
5e-140 |
429 |
226/391 (58%) |
DNAJ heat shock N-terminal domain-containing protein | chr3:2737589-2740265 FORWARD LENGTH=572 |
Transcript Sequence (2357 bp)
>PGSC0003DMT400016040 2357 pgsc_dm_v3.4
CTTCGTTTTCTTCATCATGTATGTCTCTCAAATTCACTACTACGATTTCTGAAGAACAAT
CGACCCGACAAGTTGTATTTGGATCCGAATAATCGACCCGACTATGAAGACCCGACAAAT
TTCGATAGCCATTGTTCTATGTGCATCACTCTTTGTTCTCAACGTACAATCTAAAACCGT
TGATCCTTATAAGGTGCTTGGAGTTGATAAAAGCGCAAGTCAGCGTGAGATCCAGAAAGC
TTTTCACAAGCTCTCACTCCAATACCATCCAGACAAGAACAAAAGTAAGGGTGCACAGGA
GAAATTTGCTGAGATTAATAACGCTTATGAAATTCTGTCCGATGAAGATAAGAGGAAAAA
CTATGACCTATATGGAGATGAGAAGGGAGCTCCTGGATTTGATGCTGGAGGCGCTGGAGA
TCATGGTGGATATACATACTTTACAAGTGGTGGACCAGGACAAAGTGGGTTTAACTTCGG
GCCAGGTGGTATGGGTGGTGGACAAGGAGGTGCAAAATCATTTTCATTTTCCTTTGGCGG
TCCTGGCAGCCAAAGCTCTTCTGGCTTTGGTTTAGATGATATATTCTCCAACATGTTTGG
GGGTGGTATGGGAAGTGGGAGTCAGTTTGGGGGTGGTATGGGAGGTGGGAGTAAATTTGG
GGGTTTTAGTGGCTTTGGTGGTTCAGGCAGGTCTCAGTCTAGAACCAAGAACTCTGGCAA
GAGCATCCCTTCTGTAAACTCGCAGATGTATAAGAAAGAAATATCTGATAAAGGAATGAC
TTGGCTATTACTCTCTCATACATCTACATCAAGAGATATCCAATATTATGAATCTGTCAT
CAGAGAAGTTGCAAGCTCACTGGATGGGGCAATGAAGGTGGGGAGAATAAACTGTGAAAC
TGATGCATCTTTTTGCAAGGGTCTTGGCATATATCCTCGCAATGTGCCAAGATTGTTTGT
GTATTCATTAAAATCAAGTGGGGATGGTGCGTTGATGGAGTACAGTGATGATTTAGATGT
GAAGAGGGTGAAAAGTTTTTGCCATGATCATCTTCCTAGATTCTCAAAGCGTGTAGATTT
GGACCACTTTGATTTTGTTTCCCAGACTGTAGGAGGTTTACCCAAAGTGATGCTTCTCTC
AACAAAGAAAGATACTCCAGTTATTTGGCGTGCTCTTAGTGGCTTGTATCGAAATCGTTT
TGTCTTCTATGATGCACAGGTTCGTGATTCTTCTGATCCTGCTGTCCGAAGGTTGGGTGT
TGATGCTCTTCCTGCCATTGTTAGCTGGCTATCTAATGGGGAGAAACAGATTTTGAGAAC
AGGAATCTCTGTAAAAGATCTAAAGTCGGCAATTCAAGATCTAAGTAGTTTACTGGACAA
TTTTGAAAAGAAAAATAAGAAGGCAGCTTCAGCTCAGAGTAAAAGTGAGCAGAGCGAAGC
AGAGGCTAAGCAAGTACCAGTACTGACAGGCTCTAATTTCAATGACATTTGTGGGGAGAA
AACTCCTGTTTGTGTGATTGGTGTTTTCAGGTCATCTAAAGCAAGGGATAAGCTAGAAAA
AGTTCTATTATCGGTCTCTCAAAAGTCATTATCAAGACGACAGAGTACAGCCTATGGCTC
AAGAGATTCAGTTTCCTATGCACTTTTGGATGCAGCGAGGCAGCAGTCTTTCTTGAATGC
ATTTGACAAATCAGGATATAAATCATCAGACAAGGTCCTTCTTGCATACAAGCCGCGGAA
GGGTAAGTTTGCAGTTTTTGAGGGAGACGTCACTTCTGAAGATGCAGAGAGTTTCATTAG
CTCCGTTCTCAGTGGGGACGTACAATTTTCCAACACCAGACAGAAACCTGTAGCAAAGTA
AAAAGTTAGGAGCCAACTTCAGTGGAAACGAAAAATACTGAGATCTGAAAAACATGTACA
GCCAGCCCTTTGTCATGAGCTGGAAGAAGTGGATTTAGCAGCAAAGTTTATTAACCGTTG
CCAGAGAAGGGTTCGTTTTCTTTTGGTTAACGAAATGCACATAACAGCAGCATACAACTG
AACTGAACTGAACTTACAGTATAGCATGTACGTTGTGCCAAGGTTTCTATAGTCTGGTTT
CTCAAGTCTATTGCAATTTTTCATGTATAATATAATCTTATAATCAGACTAGTTAGGCTT
GTTACTTTGTCGATGGATAAACTATCAATCAATATTTTGATAGTTGTGTTAATTAGGACT
TGTGAGTAGTAAAACATGTTAAGACAAGTTTTCTTGATTTAAGATCAAGATTTCTATGAG
AGAAAAAAGGACATTTCATGGTTTAGTTTTAGTTTGATTTTAAATTTTATAAATAATCAA
CAAAAACTGAACCCAAC
