Microarray Probes on PGSC0003DMT400015939
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_27841_PI426222305 |
JHI_St_60k_v1 |
AAAGCTAAAAGTTCCAACAATGCCAAAGCCTGAAATCCCAGAACTGCCTAAACCAACTTT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400015939
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400015939 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G09530.1 |
+1 |
4e-08 |
50 |
37/107 (35%) |
hydroxyproline-rich glycoprotein family protein | chr5:2960080-2961192 REVERSE LENGTH=370 |
Transcript Sequence (321 bp)
>PGSC0003DMT400015939 321 pgsc_dm_v3.4
ATGCCAAAGCCTGAAGTAACAACTATGCCAAAGCTAGAAATCCCAGAATTACCAAGGCCA
AAAGTCCCAGAACTTTCGAAGCCAGAAGTACCAACTATCCCAAAGCCTGAAATCTCAGAA
CTACCAAAGCCAAAAGTCCCAGAACTTCCGAAGCTAGAAGTACCAACTATCCCAAAGCCT
AAAATTCCAGAACTACCAAAGCCAAAAGTCCCAGAACTTCCAAAGCTAAAAGTTCCAACA
ATGCCAAAGCCTGAAATCCCAGAACTGCCTAAACCAACTTTTCCTTCACTTTCTCCACCA
TACAAACCCGCTACTCCTTGA
