Microarray Probes on PGSC0003DMT400015628
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_41769_PI426222305 |
JHI_St_60k_v1 |
GACAAGTGGAAAGCATTGTAGTATGTTTTTACTCGTCAATATATGGAGGGTTATTTGTTG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400015628
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400015628 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G31450.1 |
+2 |
5e-75 |
248 |
124/207 (60%) |
DNA glycosylase superfamily protein | chr2:13401318-13404134 REVERSE LENGTH=379 |
Transcript Sequence (1993 bp)
>PGSC0003DMT400015628 1993 pgsc_dm_v3.4
GCTTTAACTCTAGCCAGTCCCTCCAAAAATGTCCCTCTCTCTTCTCCGAAACACTGCATA
TCTCTCTTCACTTCCATTCCCAATTCGATTCATCTCCTTTACAGCAATGCCCAGAGCACG
CAAAATTCCTCTTCTGCAAACCCCAGGTTCTGAAGATGATGGTGTTGTTCCCAAGAACAG
AGTGAGGAAAAGGAGAGTGGAAATGATAGCTAAAGAGGTTAAGACAGAATCTCCACAGGA
AAAATTTCTCAGGCATCCAGAAATTGAAGATTTTGCAAATAAAAGTGACAATGTTTATTC
TCAATCAATACAACCTCCTGCCAACTGGGAAAGGGTCATTGAAGGTATTCGCAGCATGAG
ATTATCAGAACATGCACCTGTAGACTCCATTGACCCCGATGAAGGGGTGACTTCTCTGCA
ACCTAAGGAAAGAAGATTTGCTGTTCTGGTTGGTTCATTGTTATCAAGCCAGACCAAGGG
TCATGTTACTCATGAAGCGAATCAACGGCTCCTCGAAAATGGTTTGCTGAGTGCTGACAC
AATGGATAAAGCTGATGAAGCCACCATAAAGAGCTTGATATACCCGGTTGGATTTTACAC
AAGAAAGGCTCAGCACCTTAAACAAGTTGCAAAGATTTGTGTGTCTAAATATGACGGAGA
CATTCCTAGTACAGTTGATGACTTGCTTCTACTTCCAGGTGTTGGTCCCAAGATAGCTCA
CCTGGTTATGATTATGGCATGGAACAAAGTTGAAGGGATTTGTGTAGATACCCACGTGCA
TCGTGTTAGCAATCGGCTTGGTTGGGTCTCACGGCCTGGAACAAAACAGGTATGCTTGAT
TCTATTTAAGACGAAGCTTCACTGCTATAATGAGCAACTAGAAAATGGGGCATACACTAT
GTCATGTGTGTACAAATATTTTAAATAATTTTCTTGGGTCAACCTTTCCATACAAAGCAG
ATATGCTTATTATGAGAATTTGTTAGTGAGAGGAGTCGACCTTCCCATACCTTTCTATTT
GGGTCCCCGGGATGCCCAAGTAGGTCTATCTCTTTGCGGGGTTGGTAACAAGGGGAGAGT
GATATTGAAGGCAGAAAACTCGAGAAAAAGGAGGACTGACTACCTATAGTAGTTGGTGCT
TCATGTGCAGATGTTCGTGTTAAGACAAGGACCATCTATTGTTACATTGTCAGGTGGTTG
CGCATCTGTAGTCAGTAGGTCTAAATTGGTTTCGAATACAATGGGTAATGTCGAGTATAG
TGAAAGACACATTCTCTAATGTAATCCCAAAAGCGGAGTTTAGGGATGGTAGAGTGTATC
CACACCTTACCACTACCTCGAGCAGGTCCCATTGAGTCTAATGCAAGGAATTTATAATAA
CAAAATGTTTAGATAGAATCATTGAAACTAATAAATTTTTTAGATGAAATACTCTCAGCA
CTTCCGTTCCTACTTGCTTGACTCTGTCAGGGAACTAGATCCCCCGAAGAGACAAGGGTC
TCCTTGCAGCAGTGGCTTCCTAAAGAAGAATGGGTTTCCATTAATTTGCTTTTGGTCGGC
TTTGGGCAGACCATATGTACTCCTCTGAGACCTCGCTGTGCAAAATGTACGGTAAGTGAA
TTCTGCCCATCGGCATTTAAGGAGATATCAAGCACAGCTTCCACTTCCAAAACACGACGC
CCCAAGAAAGAACTGTGATGACAAGGTTGTTTAGCTGCTAATGTGACCAATTCAAGCTCT
ATTTTTCTAATAGTAAGTCAATTTGAGCTCAAAGGATAGTTGATCATACTATTTTGTATA
GTATTCATTTAGCAATTGATTTCTACAGAACTAGATATACATTCTGCAAATAGAAACGCG
ACAAGTGGAAAGCATTGTAGTATGTTTTTACTCGTCAATATATGGAGGGTTATTTGTTGT
TGTAGATCAACTTATAAATTTGAAAGATACTATCTAACTTGAGGTTAATTTGATCAATGA
AAATGGGTTGAGG
