Microarray Probes on PGSC0003DMT400015480
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_23611_PI426222305 |
JHI_St_60k_v1 |
CACTACCCTAATATTGGTAGACTCATCCTTAAACCATATAAATAACAACCCTTCTTCAAC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400015480
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400015480 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G49230.1 |
+2 |
8e-58 |
187 |
101/227 (44%) |
RING/U-box superfamily protein | chr1:18209320-18209979 FORWARD LENGTH=219 |
Transcript Sequence (872 bp)
>PGSC0003DMT400015480 872 pgsc_dm_v3.4
AGAAAACACAAATACAAAGTCTCAACCAAAAGCTCTAACTATGGCAACTATAACTTCCAC
TCTATTAATTCAAGAATTCATGGAGAACTTCCACTACTCAAGAAGATTACTCACGGAGTC
CACCATGGCGCCGCCACCGGCAGCCGGAATCAGCCACTCTACAACTAATCATCAACCATT
TGGTCACAAAGTCAACACATTTGATGCAAATGTCATTATGGTCTTGGCCGTACTTCTATG
TGCCTTGATTTGTTCATTTATCTTGAATTTCATCATAAAATGTGTATGTAGGTGCACTAC
CCTAATATTGGTAGACTCATCCTTAAACCATATAAATAACAACCCTTCTTCAACAAAATT
AGTCAATAGAGGGATCGAGAAAAAAACCCTCAAGACATTTCCAGTTATAACATACACTAC
TGAATTGAAACATCCAGGGTTTGACTCTGAATGTGTCATTTGCTTATCTGAATTTGGAAT
CGGAGAGAAAATTAAAGTTCTACCTAAGTGCAACCATGGATTCCATGTCAAGTGCATCGA
TAAATGGCTCAATTCACACTCTTCTTGTCCTACTTGTAGGCATTGCCTTATTGAGACTTA
CCAAAAAATTGTTCCAATTTCATCAGCTCTAGTACAAGAAGTTGTAATAAGGATTGAACC
TCTCCAACGTGAAGATGTTATATCTAATAATCAACATTAGGTAGAATTAGTAGTAGATAA
ACTCAATTAGATTAGAAACTTAGTTTTTAATTAAGTTGAGATATAGTTTAATTCCTTCTT
TTGTCCTTGTTGGAAAAGTTTTGGCTATCTATATAGTCTTGCAAGTGTATAAATTAAATT
TTGTTCTTGTTTCTTTATCAAGATGATCATGC
