Microarray Probes on PGSC0003DMT400015091
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_40103_PI426222305 |
JHI_St_60k_v1 |
GCAGAAAGACATGCTGGCGTCTTGTATGGATTAGAAGTTAATTAATTACTTTATTAGGAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400015091
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400015091 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G44260.1 |
+2 |
3e-140 |
404 |
199/278 (72%) |
Polynucleotidyl transferase, ribonuclease H-like superfamily protein | chr3:15952213-15953055 REVERSE LENGTH=280 |
Transcript Sequence (1130 bp)
>PGSC0003DMT400015091 1130 pgsc_dm_v3.4
TTTTCACTCTGCAAAACCACTCAACTTCCCCCACTTGCCTCCATTTATTTATTTCTTACT
TCCCCACCTTCTTCTCCCTCATCAAAAGCAACAAATTCTCTCATCTTTCTATATAACCAA
TCCCTTCTTCTCCTCACACTCACCAACAAGCAATTCAAAATCTTCTTTCATACTTTAATT
CCCACAATTCCTTTTCAGTTTTTACGATTACCCTTTTCAGGATTTATCATCAATGGCTAT
TAAAATTCGAGAAGTATGGGCTCATAATCTCGAATCGGAATTTGAACTCATTTCAACTGT
CATTGATAACTACCCTTACATATCTATGGATACTGAGTTTCCTGGTGTTGTTTTCAAGCC
TAAGATTTCTTACACTCGCCGCCAGAACTCCCCATCGGATCAGTATAAGCTCTTGAAGTC
TAACGTTGATGTGTTGAATCTCATTCAGCTTGGCTTAACTTTATCTGACGCTGACGGTAA
CCTTCCTGATTTGGGATCTGACGGCGGTTACATATGGCAGTTCAATTTCTCCGATTTCGA
TGTGGCGCGTGATCTCTACGCTCCAGACTCCATCGAGTTACTCCGCCGACAGGGGATCGA
CTTTGAAATGAACCGGGAATGCGGGATCGACTCCGCCCGGTTTACTGAACTGATGATGTC
GTCCGGTTTGGTGTGTAATGAATCGGTGAGTTGGGTTACGTTTCACAGCGCGTATGATTT
TGGGTACCTTGTGAAGATACTCACGCGCCGGGAACTTCCCGGTGGTTTAGAGGAGTTTAT
GGAAGTTGTGAGGGTGTTTTTCGGAAATAAAGTTTATGATATGAAGCATTTGATGAGATT
CTGTAATAGTCTTTATGGTGGTTTAGACCGGCTTGCGAAGACGTTGTCTGTAGACCGGGC
GGTCGGGAAATGTCACCAGGCCGGTTCAGATAGCTTGCTGACATGGCATGCGTTTCAGAA
AATGAGGGATATTTATTTTGTGAATGACGGGGCAGAAAGACATGCTGGCGTCTTGTATGG
ATTAGAAGTTAATTAATTACTTTATTAGGAGAAAAGAAAAATTGAGTAATTGTCTCATTT
TTTGCTAGTAAATAAAAGCTATTAAATTTATTCTTTTAAGCTGAAAATAT
