Microarray Probes on PGSC0003DMT400014627
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_6666_PI426222305 |
JHI_St_60k_v1 |
CAATTGCAGATGATAAGCGCAAGTGGGTTTACTCTACTCACGTCGTTTCCCCAAATCAAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400014627
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400014627 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G73875.1 |
+2 |
5e-131 |
395 |
202/352 (57%) |
DNAse I-like superfamily protein | chr1:27781112-27784571 FORWARD LENGTH=454 |
Transcript Sequence (1801 bp)
>PGSC0003DMT400014627 1801 pgsc_dm_v3.4
TATTTATGTCTTTTTAGTTTCACCCCTATTCGTCCTATAAAAGGTTAAACACGCGCCGCC
CAAATTCAAATCTCCCGGCAACATGGGCCGAACCGGCGACGGCAGAGATCCACCGGCGGA
ACAGCCTTCTCGGTTTTCAGCTTCAATGAAAAGTAGAATTAGTCAACATGATATTGGTAA
ACACCGTAGCAAGAAGAAGCAAAGAGTATCAATAAGTAAAACTGAAACGGAAACTGCAAC
CCTAACCCTAAATCATACTTCCACTTCTTATACACATTCATATGCAAATTCGTACTCATA
CTCGTACAGTAGGGGCAAAGAAAAACGGCATAAAGGAAAAGCAAAGAGGGCAATTGCAGA
TGATAAGCGCAAGTGGGTTTACTCTACTCACGTCGTTTCCCCAAATCAAGATAGAGTTGT
TTTTATGTCGTATAATATACTAGGGGTAAAAAATGCTGCAGCACATGAGGACCTGTACCG
CAATGTCTCTCCAAAATATTTGGATTGGGACTACCGGAAGAAGCTTATATGCAAAGAAAT
TAGGGACTATAATCCGGGTATAATGTGTTTCCAGGAGGTTGACCGTTTTGATGATTTGGA
TTATCTCCTCCAGAAAGAGGGCTTCAAAGGGGTTTATCAGGCTCGTACAGGTGATGCAAG
TGATGGTTGTGCAATATTTTGGAACAGCAAACTATTTGACATTCTGCATGAGGAGAGCAT
AGAATTCCAGAATTTTAATCTTCGCAATAATGTTTGCCAACTTTGTGCTTTCAAGATGAA
TGTGAAAAGCTCAAGCAAGGATATGAGTGCTTCAAATTCGGAGAGTGTAACCTCGCCAAG
CTTTTTGGTTGGCAATATTCACGTACTCTACAACCCCAATCGTGGAGACATCAAGTTGGG
ACAGGTTAGACTCTTTCTTGAGAGTGCCCAGAGGCTATCTCATGAATGGGGTGATATACC
AGTCGTGCTTGCTGGAGATCTAAATAGTATGCCTCAGAGTGCAATGTATCAGTTTTTGAC
TTCAAATAAGTTGGACATCCAAATGCATGACCGAAAGCAAATCTCTGGCCAAATTTATCC
ATTGCAAAATAGAAGCTTCAACCCGAGATTAAGTTATAGATGGAGTAATGAAGAGCTAAT
GCTTGCTACCGGAACAGGAGCTAGTCACTTGATACATCAGTTACAACTGCGCAGTGCCTA
TGCTGGAGCTCCTGGAAGCTCTAGAACCAGGGAAAACTCTGGAGAACCCTTGGCAACATC
ATATCATTCCAAGTTTATGGGAACTGTCGACTATATATGGCACACAACAGAGTTTGTTCC
AGTACGAGTTCTTGATACCTTACCTGTTGATATTTTAAGGAGAACAAGAGGGCTTCCTAG
TGAGGTAAGAAATGGGGAAGTGATCATCTTTCTCTAGTGTGTGAACTGGCTTTCACTGAT
GAAGGGAGTGAGACTTGACTATTCCTTTCGATTTAAGTTAAAAGTTGAAATACAATTTGG
AAGGTCCATCATGCGTGACATACTGCTTCATTGGATAATTCATCGGTGCATAGAAGAATC
TCGCGCAAACAAAAGGAACATAAGTGTACAAGGAGGAACATGGGAAGGAACGGAAACTGG
CGAAGATACATTAAAGGGATTGAAAAGACTATCCATTGTCTGTCCTCTTCATCTTAGTGA
TTTATTAATTATAAAATAAATGTTTTATTAAATATAATAAAACCATCTGAATTATAGTTT
TGCTGGATTCATCTGAAGAAAACTGTTTCTGTTTGTTTCCAACAAAAGAATGCACTATTC
A
