Microarray Probes on PGSC0003DMT400013620
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_27565_PI426222305 |
JHI_St_60k_v1 |
GGAACCCATTATGGGAAGATAGGCAACAGACTTCAAGAACTCAATGTATACCCTTAGGAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400013620
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400013620 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G60720.1 |
+2 |
1e-19 |
85 |
45/137 (33%) |
RNA-directed DNA polymerase (reverse transcriptase)-related family protein | chr1:22357072-22357941 FORWARD LENGTH=289 |
Transcript Sequence (619 bp)
>PGSC0003DMT400013620 619 pgsc_dm_v3.4
GGTTTATGAAAAGATGAGAGGAGATAGGGAGAAAGTGGAGTGGAGAAAGTTGATATGGTC
CAACTATGGTGCACCAAAGTGGTTGTTCATACTGTATTTAGCTCTAAATAGGAGGTTGTC
AACGAAAGATAGAATGGCAAAATGGGGAGTAACATCTAATTTGACATGTCCCTTATGTCA
AGTGGAGGATGAGGATATCGATCACCTTTTTTTTGCATGCATGTTCACTGCTGGAATATG
GAAGAAGCTGCTAGCTTGGCAAGGAATACAACGTACAGGAGGGAAGTGGCATGAAGAAGT
ACAATGGGTAACAACACATATGAAGAGCAACACTAGCAAAGCCAATGTGTATAGGATGGT
TATGGCAGGAACCATCTATCATGTGTGGATAGAGCGCAACAACAGAATCTTTCAGTTCAA
ACAGAGAAATGAGGAGTTCATGATTAGACACATCATTAGAGATGTACATGGAAGAGGAAC
CCATTATGGGAAGATAGGCAACAGACTTCAAGAACTCAATGTATACCCTTAGGAGAGAAG
CTGTGAGAGAAGGCTGATGGATAGAGTGTGATGTTTCAGCAAGTCTTGGAGCATGTATGT
CCAAGTCTGCTGTTTTTTT
