Microarray Probes on PGSC0003DMT400013135
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_49849_PI426222305 |
JHI_St_60k_v1 |
GTTGCTTCGGGTTTCAGTTTTGCTAATTAACTAACTGACAGCAGTTTTTAGCTGGATTTT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400013135
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400013135 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G10020.1 |
+1 |
1e-123 |
375 |
251/464 (54%) |
Protein of unknown function (DUF1005) | chr1:3269939-3271732 REVERSE LENGTH=461 |
Transcript Sequence (1659 bp)
>PGSC0003DMT400013135 1659 pgsc_dm_v3.4
GGCGCACCTCTATATGCATACGTGCCCACAGCTCATTCCGCACGCACGCCTATGCACCTT
TCTTAATATATATTCTTACCCTCAATCCCACTTTCTTCCCTAAAATTCCTCAATCTTCTT
CTTCATCTGAGTAAAAAAAAACAAGAACCGAAAGGACTAATGGATCCATGTCCGTTCGTC
CGTATTGTAATCGGAGGTTTAGCCTTGAAGTTCCCTTCTGAATCCAAAATACCACCCAAT
AGTTCAACTTTTGATTGTAAAATCAAGCTTAGAGGTTGTTCGGCGCAATCAACGACCATC
CCAGCGTTTGTTCAAGAAAGAGAAGCGATCGTGGATAATAGAATTCATGGTTGTTTTAAT
TTTAGTAAGTCAGAGCTTGTGAAATTCGTTGAGAAAGGAAAATCCAGTTGTTTAAAGATT
GAGATTTATGGGGGTAAAGTGGGTTTTGGGTATGGTAGTAAGAGGCTTTTGGGGAGTGTT
GTGGTGCCATTGGATTTGAAGAGTTTGGAGAATATTGGACATAGAGGATTTGTGATTCAG
AATGGATGGGTTTCTGTTGGTGGTGGGTCTACTGCTCAATTGAATTTAAACGTGAGAGCT
GAACCTGACCCGAGATTTGTTTTTCAGTTTGATGGAGAAGCTGAATGTAGTCCACAAGTT
TTTCAAGTTAATGGCAACGTGAAGCAACCTGTTTTTACTTGCAAGTTCAGTTTCAGAAAC
TCCGGTGACCGGAATTTGAGATCCAGATCGTCATTATCTGAAACGAGCACATCAACAAGC
TGTTTTGGTTCTTGCACATCTGATAAAGAGATATCTGTAAAAGAACGAAAAGGATGGTCA
ATTACAGTTCATGATCTTTCCGGTTCACCTGTTGCAGCAGCGTCAATGGTGACCCCATTT
GTCCCATCTCAAGGTTCGGATCGGGTCAGCAAATCCAATCCCGGATCATGGCTCATACTC
CGACCCGGTGACAACACCTGGAAGCCATGGGGTCGTCTCGAAGCTTGGCGAGAACGCAAC
GGCGAACTCGGGTACCGCTTCGAGATCATCCCGGACGGAGCCACCGACGCCATCACATTA
GTCAATTCAACAATAAGCACCAAAAAAGGTGGCAAAATCGGTATAGACATAATCAACGGA
GCTACTCCGTTGACTAGCCCCAACAGCAGCTTCGACCTAAGCTCAGGATCCGTATCCGGG
TCGGAATTCGGGTCGCAGCCCGGTTCTGGGTCGTGGGCGCAGATGCTGTATCGGGGATTT
GTGATGTCGGCGACGGTAGGAGGAGAGGGGAAATGCAGCAAACCGGAGGTGGAAGTTGGG
GTGCAGCATGTGAGTTGTGCGGAGGATGCTGCGGCGTTTGTGGCGTTGGCAGCTGCCATG
GATCTCAGTATAGATGCTTGTCGGTCATTTTCTCAGAAACTTCGAAAAGAGTTGAGACAG
CAAGACCAAGAATGATACGGTTAAAAGGGTCGGGTCGGGTCGGGTTGGGGTTGCAGTTTG
GGTTGCTTCGGGTTTCAGTTTTGCTAATTAACTAACTGACAGCAGTTTTTAGCTGGATTT
TCTTTTTATTTATTTATTTATTTATTGCCTCTTTTTTCGAGTGTACAGTGATAAGACAGC
TGTTTATTTTGAATTCCTTTTTTTTTCTCCTTCCTTTCG
